| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0130 |
|---|
| Symbol | |
|---|
| ID | 4666285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 140922 |
|---|
| End bp | 141491 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639821341 |
|---|
| Product | NAD(P)H dehydrogenase (quinone) |
|---|
| Protein accession | YP_968516 |
|---|
| Protein GI | 120608838 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0655] Multimeric flavodoxin WrbA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.93238 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.907241 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTCCT CCTCCCCCCA CCTTCTTTTC CTGAACGCCT CCACCCGCGA GCCGGGCCAC
ATCGGCAACA CCGAATGGCT GGCCCGGCAG GCCGCGGCCA CGCTGCCCGC AGGCACGGCC
CAGACCTGGC TGCACCTCGC CCGCCTCGAC CTGCCGCCGT TCGTGGACCT GCGCCACACC
ACCGGCACCT ACCCCGCGCC CGAAGGCGAT CTGCGCACGC TGCTGGATGC CACGCTCGCG
GCGTCCGAGA TCGTGTTCGT GTCGCCCGTT TACTGGTTCA GCATTCCTTC GACGCTCAAG
ACCTACCTGG ACCACTGGAG CGCCTGGATG CGCGTGCCGG GCCTGGAGTT CAAGGAGCGC
ATGGCCGGCA AGGCGCTCAG CCTGGTCACG ACCAGCGGCG ACCGCGCCAA GGCACAGCCG
ATGATCGATT CGGTGCAGCT GTGCGCCCAG TTCCTGGGCA TGCGCTACCG GGGCGCGCTC
TGGGGCAAGG GCGGGCCGCC GGGCGCGGTG CAGGCGGAAG CGGCGGCCGT GCGAGAGGCC
GCGAGCTTCC TGGCGGCGCC CCTTTCCTGA
|
|---|
| Protein sequence | MPSSSPHLLF LNASTREPGH IGNTEWLARQ AAATLPAGTA QTWLHLARLD LPPFVDLRHT
TGTYPAPEGD LRTLLDATLA ASEIVFVSPV YWFSIPSTLK TYLDHWSAWM RVPGLEFKER
MAGKALSLVT TSGDRAKAQP MIDSVQLCAQ FLGMRYRGAL WGKGGPPGAV QAEAAAVREA
ASFLAAPLS
|
|---|
| |