Gene Aave_0123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0123 
Symbol 
ID4668220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp135315 
End bp135938 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content67% 
IMG OID639821334 
ProductCDP-diacylglycerol--serine O-phosphatidyltransferase 
Protein accessionYP_968509 
Protein GI120608831 
COG category[I] Lipid transport and metabolism 
COG ID[COG1183] Phosphatidylserine synthase 
TIGRFAM ID[TIGR00473] CDP-diacylglycerol--serine O-phosphatidyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGC AAGCCCCCAA GCGTTTTTCG ATGATCCGCG AGTTCCACCT GGCCGACTGG 
TTCACGCTGG GCAACGCCGT GTGCGGCGTG GGGGCGCTGT TCTCCTCCAT GACCTTCATG
GAGACGGGCG ACGTGCGCCA CGTGTACTTC GCCGCCGCGC TGGTGCTCGC GGCGCTGGTC
TTCGACGTGC TCGACGGCCG CGTCGCGCGC TGGCGGCAGA AATCCTCCGC CATGGGCCGC
GAGCTGGATT CGCTGGCCGA CGTGATTTCG TTCGGCGTGG CCCCGGCCAT CATCGCCTAC
GCCTGCGGCA TGCAGGGCCT CTACGACCGC ATCGTGCTGG CCTTCTTCGT GGCCTGCGGC
GTCTCGCGCC TCGCGCGCTA CAACGTCACG GCGGAAACGC TCTCCGAAGG CTCGGGCAAG
GTGAAGTACT TCGAGGGCAC GCCGATCCCC ACGTCCATCG TGCTCGTGGG ACTCATGGCA
CTGGCCGCAT CGCTCGGCGC CGTGCGCGAG AACCTGTGGT TCGGCAAGCT GCTGGTGGGG
GGCTTCACGC TGCACCCCTT CGTGCTGCTG TTCGCGGTGT CCGGCTCGCT CATGATCAGC
CGGATCCGCA TACCGAAGTT TTGA
 
Protein sequence
MTPQAPKRFS MIREFHLADW FTLGNAVCGV GALFSSMTFM ETGDVRHVYF AAALVLAALV 
FDVLDGRVAR WRQKSSAMGR ELDSLADVIS FGVAPAIIAY ACGMQGLYDR IVLAFFVACG
VSRLARYNVT AETLSEGSGK VKYFEGTPIP TSIVLVGLMA LAASLGAVRE NLWFGKLLVG
GFTLHPFVLL FAVSGSLMIS RIRIPKF