Gene Aave_0119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0119 
Symbol 
ID4669015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp130284 
End bp132467 
Gene Length2184 bp 
Protein Length727 aa 
Translation table11 
GC content72% 
IMG OID639821330 
Productacetoacetyl-CoA synthetase 
Protein accessionYP_968505 
Protein GI120608827 
COG category[I] Lipid transport and metabolism 
COG ID[COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 
TIGRFAM ID[TIGR01217] acetoacetyl-CoA synthase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACAA CCACCCCCCC GCCGCGCAGC GCGGCCGCTG CCGCCGCAGC GCACGCCCCC 
TTCGTCCCGC AGATCCGGCT CTACCAGGAA TGGCTGCACG CCAGGCATGG CCTGCGGTTC
GGCGATTACG AAGCCCTCTG GCGCTGGTCC GTGACCGATC TGGACGCCTT CTGGCAGAGC
ATCTGGGATT ACTTCGGCCT CGAATCGCCC ACGCCGCACA CGGCCGTGCT GGCCCGCAAC
ACCATGCCGG GCGCCGAATG GTTTCCCGGC GCCCAGGTGA ATTACGCGCG CCAGGCCCTG
CGGCATGCCG ACGCCGCGCA TGCGGCCGGG CAGCCGGCCA TCATCAGCCG CAACGAGCGC
GGCGAGCACC GCGAACTGTC CTGGCCCGAG CTGCGCAGGC AGGTGGCGGC GCTGGCCTTG
CACCTGCGCG CGCAGGGCGT GGGGCCGGGC GACCGCGTCG CGGCCTATCT GCCCAACATC
CCCGAAGCCA TGGTGGCCCT GCTGGCCACG GCCAGCCTGG GCGCCATCTG GAGCGTGTGC
GCGCCCGACA TGGGCACGGC CGCGGTGCTG GACCGCTTCC GGCAGATCGA ACCCAAGGCG
CTGATCGCCG TGGACGGCGT GACCTACGGC GGCCGGGACC TCGACCGCCG CGGCGTGCTC
GCCGAATTGC GCGCCGCCCT GCCCACGCTG GAACACGTGG TCGTCGTGGA CCAGCTCGGC
ACGGCGGGCA CCATCGCCGG CTGCGTGGAA TACACCCAGG CCACCGCGCG GGACGATGCC
GGGGTGGCGT CCTTCGAGCC GCTCTGGCTG CCGTTCGACC ATCCGCTCTG GATCGTCTAT
TCCAGCGGCA CCACCGGCCT GCCCAAGCCC ATCGTGCACG GCCACGGTGG CATGGTGCTG
GTGGCGCTGC TGCTCAAGGG CCTGCACAAC GACATCGGCC CGAGCCACGT GCCCAACTCG
TTCGGCGAGC GCTACCACTG GTACAGCTCC ACTGGCTGGG TCATGTGGAA CGCGCAGGCG
AGCGGCCTGC TCTCGGGCAC CACCTGCGTG ATCTACGACG GCAACCCGGG CGGCAGCCGC
GAGCGCCCCG ACTGGGGCAC GCTCTGGCGC TTCGCCGCCG AGACCGGCGT GACCTTTTTC
GGCGCGGGCG CCGCCTTCTA CGCCAACTGC ATGAAGGCGG GGATCGATCT CGCGGCCTGC
GGCGACCTTT CCCGCATCCG CGCGCTGGGC ACCACGGGCT CGCCGCTCTC GCCGGAGGTG
CAGGAGTGGG GCACGGCGCA ATTCGCGCGC ATCCAGGCCC GAGCCGGGAA TGCTGCCAGC
AGCGAGCCGA TCTGGTGGGA CAACATCTCC GGCGGCACGG ATTTCTGCGG CGCCTTCATC
GGCGGCCACC GCGAGCTGCC CCAGGTGCCC GGCGAAATGC AGTGCCGCAT GCTGGGCGCG
GCGGTGGAGT CCTGGGACGA GGCGGGCCGG CCCGTCACCG GCGCGGTGGG CGAGCTGGTC
TGCACGCAGC CCATTCCCTC CATGCCGCTC TACTTCTGGG GCGATGCCCC CGCGGGGGCG
CCGGCACTGC CGGGCGACCC GCAGGGGCCG CGCTATCTCG CGAGCTATTT CGACATGTAC
CCGCCCGGCC ACGGCCGCCG GCCCGGCGGC GGCGACGGCC CCGCGTCCAT GGGCGCGGTC
TGGCGCCACG GCGACTGGCT GCGCGTCGGT CCCGAAGGCC GCTGCGTGAT CTACGGCCGC
AGCGACGCCA CCATCAACCG CCACGGCCTG CGCATGGGCA CCAGCGAGCT GTACCGCGCG
GTGGAGGCCT TGCCCGAAGT GCTCGACAGC CTCGTGGTGG ACCTGGAATA CCTGGGGCGC
GAAAGCCACA TGCCGCTCTT CGTGGCGCTG CGCGAGGGCG CCGCGCTGGA CGATGCGCTG
CGCGAACGCA TCGCAGCTGC CATCCGCACC GCGCTCTCGC CACGCTTCGT GCCCGACGAG
ATCGTGCAGG TGGCCGAGGT GCCGCGCACC CTCACGGGCA AGAAGCAGGA GCTGCCCATC
AAGAAGCTGC TGCTCGGCCA GCCGCTGGAG AAGGTGGTGA ACCGCGACGC CATGGCCAAT
CCCGGCTGCC TTGGCTGGTA CGAGGATTTC GCGCGCCGGC ACCTGGCGCG CACCGCTGCC
GTCGCCGGCG CCCCGGGGGC TTGA
 
Protein sequence
METTTPPPRS AAAAAAAHAP FVPQIRLYQE WLHARHGLRF GDYEALWRWS VTDLDAFWQS 
IWDYFGLESP TPHTAVLARN TMPGAEWFPG AQVNYARQAL RHADAAHAAG QPAIISRNER
GEHRELSWPE LRRQVAALAL HLRAQGVGPG DRVAAYLPNI PEAMVALLAT ASLGAIWSVC
APDMGTAAVL DRFRQIEPKA LIAVDGVTYG GRDLDRRGVL AELRAALPTL EHVVVVDQLG
TAGTIAGCVE YTQATARDDA GVASFEPLWL PFDHPLWIVY SSGTTGLPKP IVHGHGGMVL
VALLLKGLHN DIGPSHVPNS FGERYHWYSS TGWVMWNAQA SGLLSGTTCV IYDGNPGGSR
ERPDWGTLWR FAAETGVTFF GAGAAFYANC MKAGIDLAAC GDLSRIRALG TTGSPLSPEV
QEWGTAQFAR IQARAGNAAS SEPIWWDNIS GGTDFCGAFI GGHRELPQVP GEMQCRMLGA
AVESWDEAGR PVTGAVGELV CTQPIPSMPL YFWGDAPAGA PALPGDPQGP RYLASYFDMY
PPGHGRRPGG GDGPASMGAV WRHGDWLRVG PEGRCVIYGR SDATINRHGL RMGTSELYRA
VEALPEVLDS LVVDLEYLGR ESHMPLFVAL REGAALDDAL RERIAAAIRT ALSPRFVPDE
IVQVAEVPRT LTGKKQELPI KKLLLGQPLE KVVNRDAMAN PGCLGWYEDF ARRHLARTAA
VAGAPGA