| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0111 |
|---|
| Symbol | |
|---|
| ID | 4669618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 117605 |
|---|
| End bp | 118924 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639821322 |
|---|
| Product | ABC transporter-related protein |
|---|
| Protein accession | YP_968497 |
|---|
| Protein GI | 120608819 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAAT CCATCATCGA ACTCCACGGC GTGGGCAAGA CCTTCCGCTC TTCCGACGGC
CGCGAGCGCC CCGTGCTGCA GAACGTCGAT TTCACGCTGC GCGAAGGCGA GATCGTCGCC
CTGCTGGGAC AGTCCGGCTC GGGCAAGAGC ACGCTGCTGC GCATCATGGC GGGCCTGGTG
CCGGCCGACG AGGGCGACGT GCGCTACCGC GGCCAGCCGC TGCACGGGCC GGCGCGTGCC
ATCAGCATGG TGTTCCAGTC GTTCGCGCTC TTTCCCTGGC TCACGGTGCA GCAGAACGTG
GAACTGGGCC TGGAGGCGCG CGGCGTGCCG CAGGCCGAGC GCGCCGTGCG GGCCGAGGCC
GCCATCGAAC TCATCGGGCT GGCGGGCTTC GAGGGCGCGC TGCCGCGCGA ACTCTCGGGC
GGCATGCGCC AGCGCGTGGG CATCGCCCGC GCCCTGGTCA CCCAGCCCGA CGTGCTGCTG
ATGGACGAGG CTTTTTCCGC GCTGGACGTG CTGACCGGCG AGCGCCTGCG CGAGGACATC
CTGCAGCTGT GGCGCAGCGG CAGCATGCCT ACCAAGGCCA TGCTGGTGGT CTCGCACAAC
ATCGAGGAGG CCGTGATGAT GGCCGACCGC GTGCTGATCT TCGCCAGCGA TCCGGGCCGC
ATCCGCTGCC AGCTGTCGAT CCAGCTACCG CGCCCCCGCG ATCCGGACAG CCACCACGTG
CGCGCGCTGA TCGACGAGGT CTATGCGCTC ATGACGGCCG GCGCCGCGCG CCACGCTTCC
GCGGCCGGAG GCGCGGCGGC GGAGCCGGCG CCCGCGACGC TCACCGACCG CCTGCCCGCC
GCCGACGTGG CGCGCATGGA CGGCCTGCTG GAACTGCTGG CGGAGCCCCC CTTCGACGGC
CGCGCCGACC TGCCCCGGCT GGCGGAAGAG ACCAGCCTCA CCGACGCCGA ACTGCTGCCG
GTGGCCCATG CGGTGGCCCA GCTGGGCCTG GCGGCGCTGG CGAGCGGCGA CCTTCAGATC
ACCCCGCTCG GGCGGCGCTA TGTGGAAGGA GCCCACGGCC TGCGGCAGCA AATCTTCGGC
CAGCAGCTGC TGGCCCACGT GCCGCTCGTG GCGCACATCC GTCACAGCCT GGAACAGGAG
CCGGCGGGCG AACTGCCGGA CGCCCCCTTC CTGCGCCTGC TGAGCGAGCA GCTCGACGCC
CAGGAGGCCG AGAGCGTATT GCGCACGGCC ATCACCTGGG CGCGGCATGG CGAAGTGTTC
GAGTACGACT TCCGCACCGG GGTGATGCGC TTGCCCACAG GGGAGGAAAC CTCCTCCTGA
|
|---|
| Protein sequence | MTQSIIELHG VGKTFRSSDG RERPVLQNVD FTLREGEIVA LLGQSGSGKS TLLRIMAGLV
PADEGDVRYR GQPLHGPARA ISMVFQSFAL FPWLTVQQNV ELGLEARGVP QAERAVRAEA
AIELIGLAGF EGALPRELSG GMRQRVGIAR ALVTQPDVLL MDEAFSALDV LTGERLREDI
LQLWRSGSMP TKAMLVVSHN IEEAVMMADR VLIFASDPGR IRCQLSIQLP RPRDPDSHHV
RALIDEVYAL MTAGAARHAS AAGGAAAEPA PATLTDRLPA ADVARMDGLL ELLAEPPFDG
RADLPRLAEE TSLTDAELLP VAHAVAQLGL AALASGDLQI TPLGRRYVEG AHGLRQQIFG
QQLLAHVPLV AHIRHSLEQE PAGELPDAPF LRLLSEQLDA QEAESVLRTA ITWARHGEVF
EYDFRTGVMR LPTGEETSS
|
|---|
| |