Gene Aave_0090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0090 
Symbol 
ID4669544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp95203 
End bp95526 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content69% 
IMG OID639821303 
Producthypothetical protein 
Protein accessionYP_968478 
Protein GI120608800 
COG category[S] Function unknown 
COG ID[COG3326] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCTGG CCGGCTACGG GCTGGGCCAT CCGCCGCGCT GGACGCTCTG GCTGTACCTC 
GGTGCCAGCG TGGTCACGTT CCTGGCCTAT GCCATCGACA AGTCCGCAGC ACGGCGCGGC
GCCTGGCGCA TCGCGGAGCG AAAGCTCCAC TGGCTGGCGT TGGTGGGCGG CTGGCCCGGG
GCGCTGGTCG CGCAGCAGGT GCTTCGGCAC AAGTCGACGA AGGCGGAATT CCGCACGGTG
TTCTGGGCGA CGGTGGTGCT GAACCTGACC GGGTTCTACT TTCTGGCGAG CCCGTATGCC
CGGGTGCTCT GGCAGCGCTT TTGA
 
Protein sequence
MLLAGYGLGH PPRWTLWLYL GASVVTFLAY AIDKSAARRG AWRIAERKLH WLALVGGWPG 
ALVAQQVLRH KSTKAEFRTV FWATVVLNLT GFYFLASPYA RVLWQRF