Gene Aave_0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0058 
Symbol 
ID4666357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp63480 
End bp63911 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content70% 
IMG OID639821272 
ProductGtrA family protein 
Protein accessionYP_968447 
Protein GI120608769 
COG category[S] Function unknown 
COG ID[COG2246] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGCGG CCTTCCGCTC CCGGCAGTTC CTGGCCTTCC TGGTGACGGG CGGGGTGGCG 
GCGCTCGCCA ACTTCGGCTC GCGCATCGCG TTCAGCCACT GGATGCCGTT CTCCGCCGCC
GTGATCGCGG CCTACTGCGT GGGCATGTGC ACCGCCTTCG TACTGGCACG CGCCTTCGTC
TTCAAGGCGA GCACGCAGTC CACGCACAAG TCGGCGATGT TCTTCGTGCT GGTGAACCTG
CTGGCCGTGG CGCAGACCTG GGCCGTGAGC ATGGCCCTGC TCCAATGGGT GCTGCCCGCG
CTCGGCATCA CGGCCTTCGC GCCGGAGATC GCGCACGCGG TGGGCGTGGT GGTGCCGGTG
TTCACGAGCT ACCTGGGCCA CAAGCGCTGG TCCTTCGCGG AACAGCCGCC ACGGCGCGGC
CCCACCGGCT GA
 
Protein sequence
MIAAFRSRQF LAFLVTGGVA ALANFGSRIA FSHWMPFSAA VIAAYCVGMC TAFVLARAFV 
FKASTQSTHK SAMFFVLVNL LAVAQTWAVS MALLQWVLPA LGITAFAPEI AHAVGVVVPV
FTSYLGHKRW SFAEQPPRRG PTG