Gene Aave_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0056 
Symbol 
ID4666425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp61426 
End bp62367 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content71% 
IMG OID639821270 
Productchromosome segregation DNA-binding protein 
Protein accessionYP_968445 
Protein GI120608767 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCA AGAAACCCAA GGGCCTCGGA CGCGGCCTCG AAGCGCTGCT CGGCCCCAAG 
GTCGCGGAGG CGGCCCCCGG CGCCGAAGGC GGCGCATCCA CCGCCGCCGC CCCCGGCGCG
CCGTCCACCC TGGCGCTCGA CGAGATGGTG CCCGGCATCT ACCAGCCCCG CACACGCATG
GACGAAGGCG CGCTCTACGA GCTGGCCGAG AGCATCAAGG CCCAGGGCAT CATGCAGCCC
ATCCTGGTGC GCCGGCTGGC GCAGGGCGAG AACGCGGGCC GCTACGAGAT CATCGCCGGC
GAGCGGCGCT TCCGGGCCGC GCGCATCGCG GGGCTGGCCG AGGTGCCGGT GCTGGTGCGC
GAGGTGCCCG ACGAATCCGC CGCGGCGATG GCGCTGATCG AGAACATCCA GCGCGAGGAC
CTGAACCCGC TCGAAGAGGC CCAGGGCCTG GCGCGCCTGG TGAAGGAGTT CGGCCTGACG
CACGAGCAGG CCGCGCAGGC CGTGGGCCGC TCGCGCAGCG CCGCGAGCAA CCTGCTGCGC
TTGCTGAACC TCGCCGAGCC GGTGCAGACC ATGCTCATGG CGGGCGATAT CGACATGGGC
CACGCCCGCG CGCTGCTGTC GCTGGACCGC GCCGCGCAGA TCACGGCGGG CAACCAGATC
GCGGCGCGCA AGCTGTCGGT GCGCGAGGCC GAGGGGCTGG TGAAGAAGAT CGGCGCGGAA
TTCAGTCTGG CGCCGCAGAA GGCGCGCAAG GAGGGCAAGT CGCGCGACCT CAAGCGGGTG
GAGGAAGAAC TCTCCGACCT GCTGATGGCC GAAGTGGAGG TGCGGGTGAA AAAGCGCGTG
AAGCGCGGCG GCCGCACCGA GGAGGTCGGC GAGCTGGCGA TCCAGTTCGG CTCGCTGGAG
GCCCTCAATG GTCTCATAGA GCGCTTGCGC GGCGAGGGTT GA
 
Protein sequence
MATKKPKGLG RGLEALLGPK VAEAAPGAEG GASTAAAPGA PSTLALDEMV PGIYQPRTRM 
DEGALYELAE SIKAQGIMQP ILVRRLAQGE NAGRYEIIAG ERRFRAARIA GLAEVPVLVR
EVPDESAAAM ALIENIQRED LNPLEEAQGL ARLVKEFGLT HEQAAQAVGR SRSAASNLLR
LLNLAEPVQT MLMAGDIDMG HARALLSLDR AAQITAGNQI AARKLSVREA EGLVKKIGAE
FSLAPQKARK EGKSRDLKRV EEELSDLLMA EVEVRVKKRV KRGGRTEEVG ELAIQFGSLE
ALNGLIERLR GEG