Gene Aave_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0046 
Symbol 
ID4666275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp53068 
End bp53877 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content69% 
IMG OID639821260 
ProductABC transporter-related protein 
Protein accessionYP_968435 
Protein GI120608757 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4525] ABC-type taurine transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCCTGC GTGACGTGAG CGTGCGCTAC GCCGGCACGG ATCAGCCCGC GCTGCAGGGC 
GTCGATCTCG ATATCGCCGC GGGCGAACTG GTGGTGGCGC TGGGAGCCTC CGGATGCGGC
AAGACCACGC TGCTGAACTG CATGGCCGGC TTCACCGAGC CCTCCGCCGG AAGCATCCTG
CTGGATGGCC GGCCGGTGAC GGGGCCGGGC GCCGAGCGCG GCGTGGTGTT CCAGAAACAT
GCCCTCATGC CATGGCTGAA CGTGATCGAC AACGTGGCGC TGGGCCTGCG GCTTCGCGGT
GTTTCACGTG AAACGCGCCA GCGCCTGGCG GGCGAGCGGC TCGCCCAGGT AGGTCTGGAA
AGCTTCGCGC AGGCGCCCGT CTGGCAACTC TCGGGCGGCA TGCAGCAGCG CGTGGGCATT
GCCCGTGCCC TGGCCAGCGA CCCGCAGGTG CTGTTGATGG ACGAGCGGTT CAGCGCGCTG
GATGCGTTCA CGCGCCAATC GCTGCAGGAG TTGGTGCTGC GGCTGTGGCA GGGCACGGGC
AAGACGATTT TCTTCATTAC GCACGACGTG GAAGAGGCGT TGTTCCTCGC CTCCCGCCTG
ATCGTGATGG CGCCGCGCCC GGGCCGCATC GCGCGGCAGC ACGGGCTGGA TTTCAACCGG
CAGTTCCTGG CGGGCCGGCC CGCCCGTGCG GTGAAATCCA GCTCGGCTTT CATCGACGGG
CGTGAGCGTG TTCTGGACGA GGTGGCGCCA TCGCTGGCCC CGCAGGCAGC GGCCCGGCAA
CCGGAGCACG TGGAGCATGT CCATGCCTGA
 
Protein sequence
MSLRDVSVRY AGTDQPALQG VDLDIAAGEL VVALGASGCG KTTLLNCMAG FTEPSAGSIL 
LDGRPVTGPG AERGVVFQKH ALMPWLNVID NVALGLRLRG VSRETRQRLA GERLAQVGLE
SFAQAPVWQL SGGMQQRVGI ARALASDPQV LLMDERFSAL DAFTRQSLQE LVLRLWQGTG
KTIFFITHDV EEALFLASRL IVMAPRPGRI ARQHGLDFNR QFLAGRPARA VKSSSAFIDG
RERVLDEVAP SLAPQAAARQ PEHVEHVHA