| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0039 |
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| Symbol | |
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| ID | 4666261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 45050 |
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| End bp | 46261 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639821255 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_968430 |
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| Protein GI | 120608752 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGCTC CCCTTCTCTC CCTTCCCGCG CGGCGTCCTT CCGCGCGCGG CCTGCTGGCC
CTGGCCGCGC TCGGCGCCGC CTGCGCGCTG CTGCCCGGCT GCGGCAAGTC CGGCGCGGAA
GCCGCCGCCA CGCCGCCCGA ACCCGCCCCG CCCGTGATGC AGGCCGGCCA GCTGCGCTTT
CCGTCCGGCC ATCCGCAACT CGCCCTGCTG GGCACCGTGG AAGCCCGTGC CGCCAGGGAC
GTGGCGGTGG ACCTGCCCGC CCGCCTGGTG TGGAACGAAG AGCGCACCCA GCGCATCTAC
CCCGCCTTCG CCGGCCGCGT GACCGCCATC CAGGCCGACC TGGGCCAATC GGTCAAGGCC
GGCGCGCCCC TCGCCCTGCT GGCCTCGCCC GACTTCGGCC AGGCCCAGGC CGACACCGCC
AAGGCCCAGG CCGGGCAATC GCTGGCGCAG CAATCGCTCA AGCGCCAGCG CGAGCTGTTC
GAGGCCGGCA TCATCGCCCG CAAGGACCTG GAGCAGGCCG AGGCCGACGC CGCCGGAGCC
CAGGCCGAAG TGGCCCGCGC CGCGGCCCGC ACGCGCCTCT ACGGCAGCGC CAGCGGCGTG
AACCAGCAAC TGGCCCTCTC CACCGGCATC GGCGGCGTGG TGGTCGAGCG CAACCTCAAC
CCCGGCCAGG AAGTGCGGCC CGACCAGTCC GGCCCGGCGC TCTTCGTGGT GACCGACCCG
ACCTCCCTCT GGGTGCAGAT CGACGCGCGC GAAACCGACC TGTCGTCCCT GCGCCCGGGC
GACCCGATCA CGCTGCAGGT GCCGGCCTAC CCCGGAGCCA CCTTCGCCGG CAAGGTCACG
GCCACGGCCG ATGCCATCGA TCCGGGCACG CGCACGATCA AGGTGCGGGG CGTGGTGCCC
AACGCCGACC GCCGCCTGAA GGCCGAGATG CTGGCCAGCG CCCGCGTGCA GGAAAGCCGC
GCCGGCGGCG TGGTGGTGCC CGCCAGCGCC ATCGTGCTGG ACGGCACGCA GCACCTCGTC
TTCGTGCGCC GCGAGTCCGG CGTGTTCGAG CCGCGCAAGG TCGAACTGGC CCATGAAGGC
CCCGCCGAAG TGCTCGTTTC CGCCGGCCTG CAGCCCGGCG AAGCCGTGGT GAACCAGAAC
GCGCTGCTGC TGGCGCGCCA GTTCCAGTCC ATGGCCGAAG ACGCCGCCAC CGCGAAGAAA
GAGGCCCCAT GA
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| Protein sequence | MMAPLLSLPA RRPSARGLLA LAALGAACAL LPGCGKSGAE AAATPPEPAP PVMQAGQLRF
PSGHPQLALL GTVEARAARD VAVDLPARLV WNEERTQRIY PAFAGRVTAI QADLGQSVKA
GAPLALLASP DFGQAQADTA KAQAGQSLAQ QSLKRQRELF EAGIIARKDL EQAEADAAGA
QAEVARAAAR TRLYGSASGV NQQLALSTGI GGVVVERNLN PGQEVRPDQS GPALFVVTDP
TSLWVQIDAR ETDLSSLRPG DPITLQVPAY PGATFAGKVT ATADAIDPGT RTIKVRGVVP
NADRRLKAEM LASARVQESR AGGVVVPASA IVLDGTQHLV FVRRESGVFE PRKVELAHEG
PAEVLVSAGL QPGEAVVNQN ALLLARQFQS MAEDAATAKK EAP
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