Gene Aave_0026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0026 
Symbol 
ID4666250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp31079 
End bp32332 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content72% 
IMG OID639821242 
Productnucleoside recognition domain-containing protein 
Protein accessionYP_968417 
Protein GI120608739 
COG category[R] General function prediction only 
COG ID[COG2715] Uncharacterized membrane protein, required for spore maturation in B.subtilis. 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTCA ACTGGGTCTG GATCGGCTTT TTCACCATCG CGTTCGTGAC CGCCGCCACG 
CGCTGGGCCC TGGGCGACGC GGATGTCTTC CAGGCGCTGC TGGCCGCGAT GTTCACGGCC
GCGCGCTCGG GTTTCGAGAT TTCCATTGGC CTGGCCGGCG TGATGGCGCT CTGGCTGGGC
CTGATGCGCG TGGGCGAGCG CGCCGGCATG GTGGAACTGC TCGCGCGCGC GGCCGGTCCG
CTGCTGCGGC GCCTCTTTCC CGGGGTGCCG CAGGGCCATC CGGCGCAGGG CGCGATGACC
ATGAATTTCT CGGCCAACCT GCTGGGCCTG GACAACGCGG CCACGCCGCT CGGGCTCACC
GCCATGCGCG AGCTGCAGTC GCTGCACACC GGCCCGCGCG ATACGGCCAG CGATGCGCAG
ATCATGTTCG TGGTCATGAA CACGGCCGGG CTCACGCTGA TCCCCACCTC GGTGATCGCG
ATCCGCCAGA GCGTCGCGGT GCAGCAGGGG CTGGGCGCGG GCTTCAACGC GGCGGATATC
TTCCTGCCCA CGCTGCTGGT CACCTTCATC GCGCTGATCG CGGGCGTGCT GGCCGTGGGC
CTGTGCCAGC GGCTGCCGCT CTGGCGCCCC CGGCTGCTGC TGCCGCTCGC AGCCGTGTCC
GGGCTGCTGG GCGCGGCCGT GTGGGCGCTG GGCCGGCTGC CCGCCGAGCA GGCGTCCCGC
ATCGCGGGCA CCCTCGGCGC GGCGGTGATC CTCGGCATCG TGATGCTCTT CATCCTGGCC
GGGGCGGTGC GCCGCATCAA TGTGTACGAC GCCTTCATCG ATGGCGCCAG GGAAGGCTTC
GGCGTGGCGG TGCAGATCGT GCCCTACCTG GTGGCGATCC TGGTGGCCAT CGGCGTCTTT
CGCGCGGCCG GCTGCATGGA CGCGCTGCTG GCGGCCGTCG GCGCGGGCGT GGCAGCGCTG
GGCTGGAACA CGGATTTCCT GCCGGCCCTG CCGGTGGGCC TGATGCGGGT GCTGTCCGGC
GCGGGCGCGC GCGGGCTCAT GATCGACGTG ATGCAGGCGC ACGGCGTGGA CTCGTTCGCC
GGGCGGCTCG CCGCGGTCAT GCAGGGCTCC GCCGAGACCA CCTTCTACGT GCTGGCGGTG
TACTTCGGCA GCGTGGGCGT GAAGCACACA CGCCATGCCC TGGCCTGCGC GCTGTTCGCC
GATGCCGTGG GGCTGGCCGC GGCGATCGCG GTGGGGTATG CGATGCTGCG GTGA
 
Protein sequence
MALNWVWIGF FTIAFVTAAT RWALGDADVF QALLAAMFTA ARSGFEISIG LAGVMALWLG 
LMRVGERAGM VELLARAAGP LLRRLFPGVP QGHPAQGAMT MNFSANLLGL DNAATPLGLT
AMRELQSLHT GPRDTASDAQ IMFVVMNTAG LTLIPTSVIA IRQSVAVQQG LGAGFNAADI
FLPTLLVTFI ALIAGVLAVG LCQRLPLWRP RLLLPLAAVS GLLGAAVWAL GRLPAEQASR
IAGTLGAAVI LGIVMLFILA GAVRRINVYD AFIDGAREGF GVAVQIVPYL VAILVAIGVF
RAAGCMDALL AAVGAGVAAL GWNTDFLPAL PVGLMRVLSG AGARGLMIDV MQAHGVDSFA
GRLAAVMQGS AETTFYVLAV YFGSVGVKHT RHALACALFA DAVGLAAAIA VGYAMLR