| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0022 |
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| Symbol | |
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| ID | 4666246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 23127 |
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| End bp | 27626 |
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| Gene Length | 4500 bp |
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| Protein Length | 1499 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639821238 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_968413 |
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| Protein GI | 120608735 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCGC GCACGGATCC GGATTACCGG CGCCTGGTGG CATTGCACGC GTGCGCCATT
CTCGAGACCC CGGCCGAGGA CACCTTCGAC CAGCTCGCCC GCCTGGCGGC CCACCTGTGC
GGCGCCGCCG TCGCCGCCAT CGGGTTCATG GACGCGGGCC GCGAATGGTT CAAGGCCAGC
GCGGGCATGG AACTCGGCAC GCTGCAGAAC CTGGCGGGGG ACCATTCCCT GTGCAGGCTG
GCCCTGGGGG GCCGCCTGGT GCAGGTGGAG GATGCCCAGG TCGATCCCGT GTTGCGCAGC
CATCCCCTGG TCCAGGGCCC TTCGCGCATG CGCATGGCCG CCTGCATGCC GATCAAGACC
ACCGATGGAT TGACGCTGGG CGCGGTCGTG GTCCTGGACA CGGCCCGGCG GGCGCTGGAA
GAGTCCCACC GGGAGGCGCT GGTCGCGATC GCGAGCCAGG CGATGGCCCT GCTGGAACTG
CGGCGCCAGC GCCGCGACGT GGCACGGCGC GCACAGGAGC GGGCCCTGTC CGAAGAGCGT
TTCCACCTCG TGGCACGCGC CACCGCCGAT GCGATCTGGG ACTGGAACCT CACCGATGAT
TCGATGTGGT GGAACGAGGG GATGGAAGTC CTTTTCGGAG TCCCGCTGCA CACGTTGCCG
CACGACAGCA CGTCCTGGAC GCAGCGGCTG CATCCGGAGG ACAGCGACCG CGTGCTGGAG
AGCATCCATG CCGCCATCGA AGGCGATGCG CTGCACTGGA TGGACGAATA CCGCTTCCGC
CGCCAGGACG GCACCTATGC ATGGATCCGC GACCGCGGCT TCGTGATCCG CGATGCCCAG
GGGCAGGGCC AGCGCATGGT GGGCGGGATG ACCGACATCA GCGCCCAGAA GCAGAGCGCA
CTGCAGGCCC AGCGCGATGC CGGCGCCCAC GCGGAACTGG TGCGCGTGCA GCAGCGCATG
AGCGCGCTGG ACCTGCCCAT GGAGGAAGTC CTGCTGCTGG CGGCGCGCAC CGCGATGGAC
CTGGGGGACG GGCAGGGCGC CATGGTCGTG CTGCGCGAGG GCGACCGGCT GCGCGTGCGC
GCCAGCACCG GGCCGCGCGC CGCGCCGCTG GACGATACAC GGCCGATGCT CGGCTATCCG
CTCTGGCAGC AACTGGAAGC CGAGCAGACG GTGCTGCACA GCGATGGATC GCAGCAGCAT
GCGCTGTTCG CCACCGACGA GGGCCAGCAC GGGCTGCTGT CGTTCATCGC GGCGCCCCTG
CGCGCGGGGG ACACGGTGCT CGGCATGCTC AAGGTGAATG CCGATCCGGT GTTCACCTTC
TCCCAGCGCC AGGTGGCCTA TGTGCAGATC CTGGCCGAAT CGCTGGGGGC CGTGCTGCAA
CTGCGCAGCT ATGCCGCGCA GCTGAGCGCC TCGGAACTGC AGTACCGCTC GCTCTTCGAC
GCGCATCCGC AGCCGATGTG GGTCTATGAA CGCGGCAGCC TGCGCATTCT CGCGGTGAAC
CGCGCGATGG TGCGCCACTA CGGCTACGAG GAAGCCGAGC TGCTGCGCAT GACGACCGCC
CAGCTCTGGC CCGAACAGGA ACGTTCGCGC CAGGAGATCG AGGCCCGGGC CCTTCCGCCC
GGCGTGCGGC GCGACGCGGT GCACCGCCGC CACTGCAAGA AGGACGGCAC GCCCATCGAC
ATGGAGGTGT ACGCGGGCGA CACCACCTTC AATGGCCGGG CCGCGCGCCA GGTGCTCGCC
ACCGACGTGA CGCAGCGCAT GCGCATGGAA CGCGAACTGG CGCGCGTGGG CACCGTGCAG
CGGCTGCTGG GCGCCTGCAA CGAAGCCCTG GTGCGCGCCA CGGGAGAAAC GGCCCTGCTG
TCCGAGGTAT GCCGCATCGC CCGGGAAGTG GGCGGATACC GCAGCGCCTG GGTGGGCATG
GTGCGCCACT GGAACGGCAC CGGGCGCCAG AGCATCGAAC CCGTGGCCTG GGCCGGCCTG
ACGGCGGTTG GCGTGGAGAC CCTGCGTCCG TCCGGTACGC CCGACGCGCC CTGGACACCC
CACAGTCCCG GTCCGTCGGG GGAGGCATTG CGCAGCGGGC GGCCGGTGAT CGTCCGCGAC
CTGCGGCAGG CGCCGGACGC CGACCTGTGG GCCCGGCCGC TGCGGCAGCT CGGGCTGCCC
GCGGTCATCA GTCTGCCGCT GCGCGATGCC GAACAGGTCT TCGGCCTGCT CACGCTCTAT
CCGGAGGAGG TGCTGGAAAC CGGCGCGGAG GAAACCGAGC TGCTCCAGCA GCTCGCCAAC
GACATCGCCT TCGGCCTCGG CAGCCTGCGC ACGCGCCAGG ACCAGCAGCG CCTGCAGGCC
GTGGTGCTCA AGGCTGCGGC TGCCGTATCG GCCAGCACCG GAGCGCAGTT CTTCAGGCAA
CTGGCCAGCC ACATGTGCGA TGCCCTCGGC GCCCAGGCCG GCTGCGTCAC GCGGCTGCTG
CCGCAGCCGG GCGGCCAGAT ACCGCGCGCG GTGACGCTGT CGCGCGTGGA AGAGGGGGTG
GTCCAGCCGA ATGCCGAATA CGCCCTGGAA GGCACGCCCA GCATGCGGCT GGTGAACGAG
GCCGAGTGCG TGATCCCCGA AGGCATCGCC GAGCTCTATC CGGGTTCGCC GGTGGCGCGG
CTCGGGGCAC AGGCCTACGT GGGCCTGCAG TTGCGCAGCG CGGAAGGACA GCCCATCGGT
TTCGTCTTCG TGGTCTTCCG GGAGCCGCTG CAGCAGCCCG GCATGGTGAT TTCCACGCTG
CGCATCTTCG CGGCACGGGC GGCGGCGGAG ATGGCCCGCC AGGCATCGGA CGCGCACATC
CGCCGGCAGG CCTCGCTGCT GGACAAGGCG CGCGACGCCA TCATCGTGCG CGACCTGGAC
CACCGCATCA CTTTCTGGAA CGAAGGCGCC GAACGGCTCT ACGGCTGGAC GCGGGAGGAA
GCGACCGGGC AGTCCATCGC CGAGCTGCTC TACCAGGATA CGCAGGAATT CCTGCGGGCG
ACCCGGGCCA CGCAGGAGCA GGGGGAATGG GCGGGGGAGA TCGTCCAGTT CCACCGCGAC
GGGCGGCGCC TGGACGTGGA AGGCCGCTGG ACGCTGATCC AGGGCGAGCA GGGGCAGCCG
GACGCCATTC TGGCCATCGA TACCGATATC GGCCAGCGCA AGGCCACGGA GCGGGAGATC
CAGCGGCTGG CGTTCTACGA TTCGCTGACC GGACTGCCCA ACCGCATGCT GCTGATGGAC
CGCATGCGCC ATGCCCTGGC CACGGCGCAG CGGCGCCGGC AGGGGGGTGC GCTGCTCTTC
ATCGACCTGG ACAACTTCAA GACGCTCAAC GACACCCTGG GCCATGACCA GGGCGACGTG
CTCCTGCAGC AGGTGGCTGC CCGCCTGAAC ACCTGTGTAC GCTCCGTGGA CACCGTGGCC
CGGCTGGGCG GCGACGAATT CGTGGTGATG ATCGAGGGCC TCAGCACCCA TCCCGGCGAG
CTGGCCATGA GCGCCCGCAC CGTGGGCGAG AAGATCCTGG CCGTGCTGGC CACGCCGTAC
GTGCTGCAGG GCTACCACTA CCGCAGCACG CCCAGCATCG GCGTGGCGCC TTTCGGCGAC
GGCCGGACTT CGACCGTGGG CGAACTCCTC AAGCAGGCCG ACCTCGCCAT GTACCAGGCC
AAGACCGCGG GGCGCAATAC GCTGCGGTTC TTCGACCCGG GCATGCAGGC GGTGGTCACC
GCCCGCGCGG AACTGGAGAA CGACCTGCGT ACCGCACTGG CGCGGGAGCA GTTCATGCTG
CACTACCAGC CGCAGATCGA CCGCCGGGGC AGCGTGACGG GGGTGGAGGC GCTCGTGCGC
TGGCCGCATC CGCAGCGCGG CATGGTGTCC CCGGGGGAAT TCATCCCGCT GGCCGAGGAA
ACCGGCCTCG TGCTGCCCCT GGGCCGCTGG GTGCTGCACA CGGCCTGTGC CCAGCTGGCG
CGCTGGCAGC ACGTTCCCGG GCGCGGGCAT CTCAGCATGG CGGTGAACGT GAGTTCGCGC
CAGTTCCACC ACGAGGCTTT CGTGGAAGAC GTGGTGCGAG CCATCACCGC GACAGGCGCG
CCGGCATCGC GGCTGAAGCT GGAACTGACC GAGAGCCTCT TCGTCGAGGA CATGGAAACC
ACCATCGCCA CCATGGCCGC GCTGCGGTCC CACGGGGTGG GGTTCTCTCT GGACGACTTC
GGAACGGGGT ATTCCTCGCT GAGTTATCTC AAGCGCATGC CGCTGGACCA ATTGAAGATC
GACCAGAGCT TCGTGCGCGA CCTGCTCGCC GACCCGAACG ACGCTGCCAT CGTGGACACG
ATCATCGCGC TCTCGCGCAG CCTGGGCCTG GACGTCATCG CCGAGGGCGT GGAAACCGCC
GAACAGCGCA CCCGCCTGGA ACAGGCGGGC TGCCGCGCCT ACCAGGGTTA CTTCTTCAGC
CGGCCGCTGC CCGAAACCGC CCTGGAAGAT TTCCTGGTCC AGAAGCTGCC CTCGCGCTGA
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| Protein sequence | MPARTDPDYR RLVALHACAI LETPAEDTFD QLARLAAHLC GAAVAAIGFM DAGREWFKAS
AGMELGTLQN LAGDHSLCRL ALGGRLVQVE DAQVDPVLRS HPLVQGPSRM RMAACMPIKT
TDGLTLGAVV VLDTARRALE ESHREALVAI ASQAMALLEL RRQRRDVARR AQERALSEER
FHLVARATAD AIWDWNLTDD SMWWNEGMEV LFGVPLHTLP HDSTSWTQRL HPEDSDRVLE
SIHAAIEGDA LHWMDEYRFR RQDGTYAWIR DRGFVIRDAQ GQGQRMVGGM TDISAQKQSA
LQAQRDAGAH AELVRVQQRM SALDLPMEEV LLLAARTAMD LGDGQGAMVV LREGDRLRVR
ASTGPRAAPL DDTRPMLGYP LWQQLEAEQT VLHSDGSQQH ALFATDEGQH GLLSFIAAPL
RAGDTVLGML KVNADPVFTF SQRQVAYVQI LAESLGAVLQ LRSYAAQLSA SELQYRSLFD
AHPQPMWVYE RGSLRILAVN RAMVRHYGYE EAELLRMTTA QLWPEQERSR QEIEARALPP
GVRRDAVHRR HCKKDGTPID MEVYAGDTTF NGRAARQVLA TDVTQRMRME RELARVGTVQ
RLLGACNEAL VRATGETALL SEVCRIAREV GGYRSAWVGM VRHWNGTGRQ SIEPVAWAGL
TAVGVETLRP SGTPDAPWTP HSPGPSGEAL RSGRPVIVRD LRQAPDADLW ARPLRQLGLP
AVISLPLRDA EQVFGLLTLY PEEVLETGAE ETELLQQLAN DIAFGLGSLR TRQDQQRLQA
VVLKAAAAVS ASTGAQFFRQ LASHMCDALG AQAGCVTRLL PQPGGQIPRA VTLSRVEEGV
VQPNAEYALE GTPSMRLVNE AECVIPEGIA ELYPGSPVAR LGAQAYVGLQ LRSAEGQPIG
FVFVVFREPL QQPGMVISTL RIFAARAAAE MARQASDAHI RRQASLLDKA RDAIIVRDLD
HRITFWNEGA ERLYGWTREE ATGQSIAELL YQDTQEFLRA TRATQEQGEW AGEIVQFHRD
GRRLDVEGRW TLIQGEQGQP DAILAIDTDI GQRKATEREI QRLAFYDSLT GLPNRMLLMD
RMRHALATAQ RRRQGGALLF IDLDNFKTLN DTLGHDQGDV LLQQVAARLN TCVRSVDTVA
RLGGDEFVVM IEGLSTHPGE LAMSARTVGE KILAVLATPY VLQGYHYRST PSIGVAPFGD
GRTSTVGELL KQADLAMYQA KTAGRNTLRF FDPGMQAVVT ARAELENDLR TALAREQFML
HYQPQIDRRG SVTGVEALVR WPHPQRGMVS PGEFIPLAEE TGLVLPLGRW VLHTACAQLA
RWQHVPGRGH LSMAVNVSSR QFHHEAFVED VVRAITATGA PASRLKLELT ESLFVEDMET
TIATMAALRS HGVGFSLDDF GTGYSSLSYL KRMPLDQLKI DQSFVRDLLA DPNDAAIVDT
IIALSRSLGL DVIAEGVETA EQRTRLEQAG CRAYQGYFFS RPLPETALED FLVQKLPSR
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