Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0021 |
Symbol | |
ID | 4666244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 21747 |
End bp | 22889 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639821237 |
Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
Protein accession | YP_968412 |
Protein GI | 120608734 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCGCA CCATTTCCCA GGACGCCGGC GGCGTCGCCT CCGCTTCGCA CGTCCACCGC GCCACGCCGC AGTCCGGCAC GCACGACACC ACCCGCATCG ACGACACGCG CATCAAGGCG GTGCGGCCGC TGATCACGCC CGCGCTGCTG CAGGAGTGGC TGCCCGCCTC GGACGACGCC CGGGCCCTGG TGGAATCCAG CCGCGCCGCG CTTTCGCGGG TGCTGCACGG CGAGGACGAC CGGCTCATCG TGGTGGTGGG GCCGTGCTCC ATCCACGACC ATGGCCAGGC CATGGAGTAC GCGAAGGCGC TCAAGGCGCA GGCCGACCGG CTGTCCGCGG AACTGCTGGT GGTCATGCGC GTGTATTTCG AGAAACCCCG CACCACGGTG GGCTGGAAGG GTTACATCAA TGACCCGCAC CTGGACGGCA GCTTCGCGAT CAACGAAGGC CTGGAGATGG CGCGCAAGCT GCTGCTGGAC GTGCTGGCGC TCGGCCTGCC CGTGGGAACG GAATTCCTGG ACCTGCTCTC GCCGCAATTC ATCAGCGACC TGGTGAGCTG GGGTGCGATC GGCGCGCGCA CCACCGAGAG CCAAAGCCAC CGCCAGCTGG CCAGCGGCCT GTCCTGCCCC GTGGGCTTCA AGAACGGCAC CGATGGCGGT GTGAAGGTGG CCTCCGACGC CATCCTCGCC GCACAGGCGC CGCATGCCTT CATGGGCATG ACCAAGATGG GCCAGGCCGC CATTTTCGAG ACGCGCGGCA ATCGCGACTG CCACGTGATC CTGCGCGGCG GCCGCCAACC GAACTACGGG GCGGCCGACG TGGACGCGGC CTGCGGCCTG CTGCGCGGCA CGGGACTGCG CGAGCAGGTG ATGATCGATG TCTCCCATGC CAACAGCAGC AAGCAGCACC GCCGCCAGAT CGAGGTGGCG GCCGACGTGG CGGCGCAGGT CGCCGCCGGC GACGGCCGCA TCACCGGCGT GATGATCGAA AGCCATCTGC GGGAAGGCCG CCAGGACATC GTGCCCGGGC AACCCCTGCA GTCCGGCGTG TCGGTGACGG ACGCCTGTAT CGGCTTCGAC CAGACGGTGC CGGTGCTCGA GGGACTCGCA GCCGCCGTTC GGTCGCGCCG CAGCCACCGC TGA
|
Protein sequence | MNRTISQDAG GVASASHVHR ATPQSGTHDT TRIDDTRIKA VRPLITPALL QEWLPASDDA RALVESSRAA LSRVLHGEDD RLIVVVGPCS IHDHGQAMEY AKALKAQADR LSAELLVVMR VYFEKPRTTV GWKGYINDPH LDGSFAINEG LEMARKLLLD VLALGLPVGT EFLDLLSPQF ISDLVSWGAI GARTTESQSH RQLASGLSCP VGFKNGTDGG VKVASDAILA AQAPHAFMGM TKMGQAAIFE TRGNRDCHVI LRGGRQPNYG AADVDAACGL LRGTGLREQV MIDVSHANSS KQHRRQIEVA ADVAAQVAAG DGRITGVMIE SHLREGRQDI VPGQPLQSGV SVTDACIGFD QTVPVLEGLA AAVRSRRSHR
|
| |