Gene Aave_0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0020 
Symbol 
ID4666242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp21112 
End bp21666 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content73% 
IMG OID639821236 
ProductNLP/P60 protein 
Protein accessionYP_968411 
Protein GI120608733 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTCCG AGTTCCCCCT TGCCCGCAGC GCCCGCGGTG ACGGTGCCGC CGCGGGAACT 
TCCTCCCGCC GGGTCGTGCT CGCCGCAGCA TCGCTGGCGG CCGTGCTGCT GCTGCCGGCC
TGCGGCACGT CGCCCTCCCG CGGCCGGCGC GGCGCGGCGC CCGGTTACAC GTATTCGCGC
CTCACGCCCG AGCAATCGAG CGACATCGCG ATCCACGCGA TGGGCCTGGT CGGCACGCCG
TACCGCTACG GCGGCAACAC GCCCGAGGGC GGGTTCGACT GCAGCGGCCT GATCGGCTAC
GTCTACCGCA GCCTCGCCGG GATTCCGCCG CCGCGCACCG TGGCGCAACT GAGCGATTTC
GGCGCCCCGG TGGAGGCGGG CGAGGAGCGC ACCGGCGACC TGGTGATCTT CGGCTCCGGC
CGGCCGACGC ATGCGGGGAT CGTGGTGGAA GGCGGCCGCT TCGTGCATGC TCCCTCCACC
GGCGGCACGG TGAAGCTGGA CCGTTTCAGC TCGGGCTACT GGTCCCGCCA GCCGATCGCG
TTCCGCAGGC CGTGA
 
Protein sequence
MQSEFPLARS ARGDGAAAGT SSRRVVLAAA SLAAVLLLPA CGTSPSRGRR GAAPGYTYSR 
LTPEQSSDIA IHAMGLVGTP YRYGGNTPEG GFDCSGLIGY VYRSLAGIPP PRTVAQLSDF
GAPVEAGEER TGDLVIFGSG RPTHAGIVVE GGRFVHAPST GGTVKLDRFS SGYWSRQPIA
FRRP