Gene Aave_0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0013 
SymboldinG 
ID4666233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp12900 
End bp15125 
Gene Length2226 bp 
Protein Length741 aa 
Translation table11 
GC content73% 
IMG OID639821229 
ProductATP-dependent DNA helicase DinG 
Protein accessionYP_968404 
Protein GI120608726 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1199] Rad3-related DNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAAC AGGAGTGGGC CGCGCAGGCC CTGCAGTCTT TCGATGCGGT GGTGCAGGCC 
ACCGAGGGCT TGCGCAGCCG CGGCGGGCAG CGGCGCATGG CCGAGCAGGT GGCGCACACG
TTCGCGCGGG CACAGCTCGG CAAGGTGGAG GCCGAAGACG GCGACAGCGC GCCTGCGCCG
CCCGCGCGCT CCATCGCGGT GGTGCAGGCC GGGACGGGCG TGGGCAAATC GCTCGCCTAC
AGCGTGCCGG CGATCGCCAT GGCGCTTGCG CGCGGTACGC GCGTGCTGAT TTCCACGGCC
ACCGTGGCGC TGCAGGAACA GCTCGTGCAG AAGGACCTGC CGGCGCTCGC GGCCCGCATG
CCGCAGCCCT TCCAGTTCGC GCTGGCCAAG GGGCGCGGCC GCTACGTGTG CAAGCTCAAG
CTGGAGCGCC TGGCAGGCAC CGGGGAGGCC GGTGACGAGG GGCCCGAGGA CGACCTGTTC
GCCGAGGAGG AGGCCGCGGC CCGCGCCGCC CGCCCGCGCC ACGAGACCGA GGCACGCATG
AAGTTCTACG CCACCATGGC CGACGTGCTC GCGCGCGGCG CATGGGACGG CGACCGCGAC
ACGCTGGAAT CCCCGCCCGA GCCCGAGGTC TGGAGCCCGG TGGCGGCCGA GGCCAGTTCC
TGCACCGGCA AGCACTGCCC GGCCTTCGGC CAGTGCACCT ACTACGACCG GCGCAAGGCA
CTGGTGGCCG CGCAGGTGAT CGTGGCCAAC CACGACCTGC TGCTGTCCTC GATCGGGGCG
CGGCTGCTGC CCGAGCTGGA CAACTGCCTG CTCGTGGTGG ACGAAGCCCA CCACCTGCCC
TCCACCGCGC TCGACCAGTT CGCCTGCGAG GCGGACCTGA GCCGGCTGAA CTGGATCGAC
AAGCTCGCGA GCCGCGCGCT GCGCATCGGC ACGCTGATGG AAGTCGAGGA AGTGGCGGAC
ATCCCCAACC ATTCCGCCCG GCTGCGCGCC GCGCTGCAGG ACGCGGCGCG CATGGTCATG
GACGTGTACG GCGACGAACT GCGCGCACCG CGGCCCGCCT GGGGCGGAGG GCGCACCGCA
TCCACGCAAT CCTCCCGCAT TCCCGCGGCC GCGGCGCCCA CGCGCGCACG CGTCCCGGGA
GGCGCGCTGC CCGAGGCGCT GGTGGAGCCC TTCAGCCAGG TGGCGCACCA TGCGGCGGGC
TTTCTCGACG CGCTGCGCGC CATCGCCAAG GCGCTGCGCT CGGAAATGCG CGACAAGCCC
GACGAGGCGC GGCGCCTGTC CACGCTCTAT GCGCAGATCG GCGCGCTCGC GCCCCGGCTG
GAGGGCGTGC ACGACACGGC CCAGCTGCTG CTGCAGGACG CGCCGGAGGG CGCCGTGCCG
GCAGCCAAGT GGTTCACGCT GGCGGTGGAT GGCGACTTCA TCGTCGTCAA GGCCCATGCC
AGCCCGGTAC TGCCGGGCAA TACGCTGCGC AACCACCTGT GGTCGGCCGT GCGCGGGGCC
GTGCTCACCT CGGCCACGCT CACGAGCTGC GGCCAGTTCG ATTTCTTCCT GCGCGAGGCC
GGCCTGCACG GCGACGACGC CGTCACCACC CTGGAAGTGC CTAGCCCCTT CGACTATGCG
CTGCAGGGCA CGCTCGTGGC CACCGAGACC CAGGCCGATC CCCGGCAGGC GGCCGACTAC
ACCGCAGAAA TGGTGGACGC GCTGCTGAGC GACCTCGCCA TGGTCGAGGC CGGCGCCCTG
GTGCTGTTCA CCTCGCGCGA CCAGATGCGG CAGGCCGTGG ACGCACTGCC CACCGCCATG
CGCAGCACGG TGCTGGTGCA GACGCAGATG CCGCGTTCCC AGCTGCTGGC ACGGCACCGC
GAGCGCGTGG CGGCGGGCGA GCCGTCGATC ATCTTCGGCA TGCAGTCCTT CGGCGAGGGG
CTGGACCTGC CCGGGGCGCT CTGCGAATCG CTCTTCATCA CCAAGCTGCC TTTCGCGCCG
CCGGACGACC CGGTGGGCGA GGCGCGGGCC GAGTGGCTGC GCGGCACGGG GCGCGACCCG
TTCAGCGAAC TCGTGGTGCC CGCCACGGCC ATCCGGCTCG CCCAGTGGGT GGGACGCGCC
ATCCGCACCG AGGAAGACCG CGCCCACGTC TATTGCTACG ACAGGCGTCT GGTGCGCACG
GCCTACGGCC AGCGGCTGCT CAAGGGCCTG CCGCCGTTCA CGCTGCAGCG CCGCACCGCG
GCGTAG
 
Protein sequence
MSQQEWAAQA LQSFDAVVQA TEGLRSRGGQ RRMAEQVAHT FARAQLGKVE AEDGDSAPAP 
PARSIAVVQA GTGVGKSLAY SVPAIAMALA RGTRVLISTA TVALQEQLVQ KDLPALAARM
PQPFQFALAK GRGRYVCKLK LERLAGTGEA GDEGPEDDLF AEEEAAARAA RPRHETEARM
KFYATMADVL ARGAWDGDRD TLESPPEPEV WSPVAAEASS CTGKHCPAFG QCTYYDRRKA
LVAAQVIVAN HDLLLSSIGA RLLPELDNCL LVVDEAHHLP STALDQFACE ADLSRLNWID
KLASRALRIG TLMEVEEVAD IPNHSARLRA ALQDAARMVM DVYGDELRAP RPAWGGGRTA
STQSSRIPAA AAPTRARVPG GALPEALVEP FSQVAHHAAG FLDALRAIAK ALRSEMRDKP
DEARRLSTLY AQIGALAPRL EGVHDTAQLL LQDAPEGAVP AAKWFTLAVD GDFIVVKAHA
SPVLPGNTLR NHLWSAVRGA VLTSATLTSC GQFDFFLREA GLHGDDAVTT LEVPSPFDYA
LQGTLVATET QADPRQAADY TAEMVDALLS DLAMVEAGAL VLFTSRDQMR QAVDALPTAM
RSTVLVQTQM PRSQLLARHR ERVAAGEPSI IFGMQSFGEG LDLPGALCES LFITKLPFAP
PDDPVGEARA EWLRGTGRDP FSELVVPATA IRLAQWVGRA IRTEEDRAHV YCYDRRLVRT
AYGQRLLKGL PPFTLQRRTA A