Gene Aave_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0007 
Symbol 
ID4666226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp8660 
End bp9289 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content63% 
IMG OID639821223 
ProductDNA polymerase beta subunit 
Protein accessionYP_968398 
Protein GI120608720 
COG category[R] General function prediction only 
COG ID[COG1669] Predicted nucleotidyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACA CTTCGTCCTT GATGGATCTG CTGTTCCCCG CCGCAAGGCA GCGGGTACTG 
GCTGCGCTGT TGCTGCAGCC ACAGCAGACG TTCCATCTCC GTGAGCTGGC ACGGCTTACA
GGTAGCCATG CCGGCACACT GGCGCGCGAA GTGGACAAGC TCACCGCTAC GGGTCTGCTG
CTGCGCAGCC AGCAGGGCAA CCAAGTGCGC TATCAAGCGA ACACAAGCCA CCCGCTGTTC
AGCGATCTGT CATCGATCTT TCGCAAGACG CATGGCGTGG TCCCAGCACT GCGCGATGCA
TTGGCACCAC TGGCTGACCG GATCCGCATC GCGCTCGTTT TCGGTTCGGT GGCACGGGGG
ACGCCATCGC CAGGCAGCGA CGTGGACCTG CTGGTGCTGG GCGACGTAGG GTTCGTGGAA
CTGGCACAGG TGATTTTTCC GCTGCATGCG GCACTGGGCC GCGAGGTGAA CCCTGTGCTC
TATACGGCTG AGGAATTCGC GACGCGTGCG CGCAGCGGCG ATGCATTTGC GCGCGACATC
CTGGCCAAGC CAAAATTGTT CATCCAGGGA GGAGCCGATG AGTTTGCAGA ACTTGCTGGC
GATCGGGCGG CTGCAGGCCC ACCAGCCTGA
 
Protein sequence
MSNTSSLMDL LFPAARQRVL AALLLQPQQT FHLRELARLT GSHAGTLARE VDKLTATGLL 
LRSQQGNQVR YQANTSHPLF SDLSSIFRKT HGVVPALRDA LAPLADRIRI ALVFGSVARG
TPSPGSDVDL LVLGDVGFVE LAQVIFPLHA ALGREVNPVL YTAEEFATRA RSGDAFARDI
LAKPKLFIQG GADEFAELAG DRAAAGPPA