Gene Dvul_2953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2953 
Symbol 
ID4663270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp3460637 
End bp3461203 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content65% 
IMG OID639821216 
Producttripartite ATP-independent periplasmic transporter DctQ 
Protein accessionYP_968391 
Protein GI120603991 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGCCC TGCGGCTGAC TGCCCGTCTT CTGGATACGG CCAGCGAAAA GGCGGACCGT 
GCGGCACGGC TTTGGCTCAT CACCGCCATG GCAGGCATGG CCGTGCTGGT GGCCGTACAG
GTCTTCTCCC GCTACGCACT CAACGAGTCC CTTTTCTGGT CGGAGGAATT GGGCCGCATC
CTGCTTGTGC AACTCACCTT CATCGGTTGC GCCGTAGCGG TGCGCGCAGG GGCGCATCCC
GGCATGGATG CCCTTGTCCG GCATCTTCCC AGGCGCGGAC GTCACGTCAC GCACATGCTG
GTGCTTCTGG CGGCACTGGC CTTCTTTGCC TTGCTGGCAT GTCACGGCGC ACGCTTCGCG
TGGTTCGTTC GCCATCAGTC CACACCCGCA CTCGGCCTGT CACGGCTCAT TCCGGCATTG
CCCCTGCCCG TTGGCGGGGC GCTGTCCATG CTGCATGTGC TGGCAATACT GGCCAGACAC
GCCACAGGAG ACCGACAGGG CGGTGGAGAC GACGGTCTTG CAGACCACGC ATCAGACACC
CCCTCGCCCA CCGGGGACCG CCCATGA
 
Protein sequence
MCALRLTARL LDTASEKADR AARLWLITAM AGMAVLVAVQ VFSRYALNES LFWSEELGRI 
LLVQLTFIGC AVAVRAGAHP GMDALVRHLP RRGRHVTHML VLLAALAFFA LLACHGARFA
WFVRHQSTPA LGLSRLIPAL PLPVGGALSM LHVLAILARH ATGDRQGGGD DGLADHASDT
PSPTGDRP