| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2943 |
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| Symbol | |
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| ID | 4664209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 3446853 |
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| End bp | 3449303 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639821205 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_968381 |
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| Protein GI | 120603981 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACTG CTTCCATGAA TGATGCGCAG GGCAACAGTC CAAGATACGC GTCATCCCCG
ACCGTCTCCA TGACGGTCAT CACACTGGTG CTGGGCATGC TGCTTCCTGC CGTCGTCTCC
ATCCTCATGC TCATGGCGTC GACACAATCG CGCATCAGTG AAGAAGAGAA CATGATGCGT
GCGGGCCTCG TCGAGGGCAT GGGTCTGCAA GTGGACGAGG TCGTGGACGC CCTCGCCCAG
TCGCTGGAGG TCATCGCGGC CAATGGCGGC GCAGATGCCG ATGACGCCAC ACGCTGGACA
CGCCTGCTTC AGGCCTCACG CGCCTTCGGC AAGCAATTTC TCGAATTCCA TGTGGCCAAC
CCCAACGGCG ACGTCATTTC CTCCAGCGCA AGCCTGCCCG AAGGCATCAA CGTGGCGGAC
AGGGCGTATT TCTCGACCAG CCTCGCCACC GAGGGCATGG TAGCCAGTGA AGGCCTCGTC
AGCCGCCATA CGGGCCAGAT TGCCCTGTAT TTCGCACTTG CCGTCCGTAG CGACGAGGAG
GCGCACTCCG GGGTCGTCTT CGCGGGTTTC AACGGCGAGG TCTTCGGCGA CATGCTGCGC
AAGGCGGGGC CCCGTAGCGA CGGGTTGACC GTCTTCGTCC TCGACCGCAA CGGCGATTCT
GTATATGAGC ACCTGCCTTC AGGTGGGCGG CACCCTGTGC ACATACCCCC GGCAGACCTC
AGGGATTGCG CTGATGGCAG ACGCGCGTGG CTTGAGTTCG GCGGCACCCG CCACGCCGTT
TCCGTCATGG CAAAACGCCT TGCGACCGGC GAGGCACCGT ACCTGTACCT CCTTGTCTCC
ACCCCTGATG AGAGCTTCTT CTCCCTCTCC ACCCTGCGTG GCGTGACCCC GCTGCTACTC
GGTACCCTGT GTGTCGCGCT GGCGGCCCTT GCCGCAGCCA ACCGGCGCAT CGTCCACCCG
CTGGAAAGCC TCACGCGCAA GGTGCAGGCC ATCGAAGCCG GGCAACCTCT TCCCGAAACG
GCGATAGAGT CGGTGCGCGA GATAGGCGGA TTGCAGACCG CCGTCACACG CATGGCCCAG
GCCATATCCC AGCGCGAACA GGAACTGGCA TGGTTCGCCA CCCACGACGA CCTCACGGGG
CTTGCCAATC GCAAGGCCCT GCACGAGATG CTGGCTGCGC GTCTCGACAG GCTCGAAGAG
GGGGCCAGCG AAACCGTCGC CGTCATCTTC ATCGACATCG ACCGTTTCAA GGCCATCAAT
GACAGCATGG GGCACACGTG GGGCGACAAC GTCATCGCCG CCTTCGCCGC ACGCCTCGGT
GCGTTCATGC ACCCCCTGCA CGCCTTCTGT GCACGGGTGG GCGGTGATGA ATTCGTCGTC
GTCCCCGACG CGTCGGCCAC GCACAACGTC GTGCGCGACA CCCGCGCACT GCTCGCCCAT
CTTGGCACAC CCTATGACAT CAACGGTCGA GAGGTTCGCC TTTCAGCCAG TGCCGGGGTG
CTCTTCGTGG GCGACCCGGG CGAAAGCCCC GATGTCATCA TCCGCAACGC CAATGCAGCC
ATGCACCGCT CCAAGGAGCG CGGCTTCGGG CGCATCAGCA TCTTCCGCCC CCTGCATCTC
GACAGCTACA TGCTGCGACT CGACATCGAA CGCGAACTTC CCCTCGCGGC GGCGACCGGG
CAACTGCATA TGGTCTACCA GCCCATCGTC AACGCCAGTG ACGGTTCGCT GCACTCCTTC
GAAGCCCTGA TGCGCTGGAA CCACCCACGT CACGGGTCAC TGTCGCCCGC CACCTTCATC
ACCGTGGCGG AACAGACGGG ACACGTGGGG CTGCTGGGCG ACTTCGCCCT GCGCGAGGCC
GGGGCATGCG TCAGACGCTT CGGTGAGGCA GGACTCCTCA CGCCCGGATT GCGCTTCGGA
GTGAACATCT CCCCGGCACA TCTCATGGCG CAGGATTTCC TCTCCGACAT AGAAAGCGTG
CTCGACGCCG TCTCGGTACC CGGAGACCGC ATCACGCTCG AAGTCACCGA ATCGGCCCTC
ATATCCACCG GGGCTGAGCT CATGGGCAGA CTCGAGACTC TGGCCAAACG CGGCCTCAAC
TTCGCCATCG ACGACTACGG TGCCGGGTAT TCCAACATCC AGTACCTCGC CAGTGAGCAC
TTCAGGGTGA TCAAGATCGA CAAGTCGCTC ATAGACGAAG TGCACCTGCG CGACAGGATG
CGCGCCATCG TGCGTTCCAC AGTACAACTG GCCCATAGCC TGGGCTGCAA GATAGTGGCC
GAAGGCGTGG AGACCCACGC GCAGGCCAAT CTTCTGGCGC GTCTCGGGTG CGACTACCTG
CAAGGCTACC TTTTCTCGCG CCCTGTGCCC GAGACGGATG CCATGCGCCT TGCCATACGC
GCCATGGAGC AGGGCACGCT GCTGCCCCCC GAAGCCCATC CTGACGCGTA G
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| Protein sequence | MSTASMNDAQ GNSPRYASSP TVSMTVITLV LGMLLPAVVS ILMLMASTQS RISEEENMMR
AGLVEGMGLQ VDEVVDALAQ SLEVIAANGG ADADDATRWT RLLQASRAFG KQFLEFHVAN
PNGDVISSSA SLPEGINVAD RAYFSTSLAT EGMVASEGLV SRHTGQIALY FALAVRSDEE
AHSGVVFAGF NGEVFGDMLR KAGPRSDGLT VFVLDRNGDS VYEHLPSGGR HPVHIPPADL
RDCADGRRAW LEFGGTRHAV SVMAKRLATG EAPYLYLLVS TPDESFFSLS TLRGVTPLLL
GTLCVALAAL AAANRRIVHP LESLTRKVQA IEAGQPLPET AIESVREIGG LQTAVTRMAQ
AISQREQELA WFATHDDLTG LANRKALHEM LAARLDRLEE GASETVAVIF IDIDRFKAIN
DSMGHTWGDN VIAAFAARLG AFMHPLHAFC ARVGGDEFVV VPDASATHNV VRDTRALLAH
LGTPYDINGR EVRLSASAGV LFVGDPGESP DVIIRNANAA MHRSKERGFG RISIFRPLHL
DSYMLRLDIE RELPLAAATG QLHMVYQPIV NASDGSLHSF EALMRWNHPR HGSLSPATFI
TVAEQTGHVG LLGDFALREA GACVRRFGEA GLLTPGLRFG VNISPAHLMA QDFLSDIESV
LDAVSVPGDR ITLEVTESAL ISTGAELMGR LETLAKRGLN FAIDDYGAGY SNIQYLASEH
FRVIKIDKSL IDEVHLRDRM RAIVRSTVQL AHSLGCKIVA EGVETHAQAN LLARLGCDYL
QGYLFSRPVP ETDAMRLAIR AMEQGTLLPP EAHPDA
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