Gene Dvul_2901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2901 
Symbol 
ID4664942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp3395487 
End bp3396671 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content67% 
IMG OID639821162 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_968339 
Protein GI120603939 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTGA GGTTCTTCAT GGGGCAGCGG GTGCTGCCTT TCGTGCTGGT GGTCGCCATG 
ATGGCGGCGC TTACGGGGTG CAAGGAAGAG GCCCAGAAGG GGGCACCGCC CGCTCCTCTC
GTCGAGGTGA AGACCATCAC CGCAGGCGAT GTGCCCGTGA CCAGCGAATA TGTGGCCCAG
ACAGCGGGTT CGCGCGAGGT CGAGGTCAGG GCCCGCGTCA CAGGCATCCT GCTCAAGCGC
ACCTACACCG AAGGGCGCCC CATCAAGAAG GGCGCACTCA TGTTCGAGAT CGACCCCGAT
ACGTACAAGG CGGCGCTCGA TCAGGCCGAA GGCCAGCTGG CACAGGAGCA GGCGCGCCTT
TCCCGTGCCC GTCTCGAACG TGACCGCGTT CTCGCCCTCT ACGCCGACAA CGCCGTCAGC
CAGAAGGACC GCGACGATGC CGTGACGGAG TTCGACTCTG CCAGCGCTGC CGTCAAGGTG
GCACAGGCCC GTGTCAAGGA GGCCCGCATC AACCTCGGCT ATACCCGCGT CGATGCGCCC
ATCGCCGGGG TCACCAGCAA GGAGGTGCGG TCGGAGGGTA GCCTTGTCAG CCCTTCCGCC
GACGGCAGCC TGCTCACGAC GATCACGAGA CTCGACCCCC TGTACGTCAA CTTCGGGGTT
CCCGGTACCG AGATGAGTTC GCTGCGTCGC CTCATCGAAT CCGGCAAGGC CGAGATGCCT
GCCGACGGCC TTGCGGTGCA GCTGACCCTG CCTGACGGCA CGGTCTACGC CCGCACCGGC
AAGATCACCT TCACCGACAA GCAGGTCGAC CAGACCACCG GCACCGTGCG CAGCCGCGCC
GAGTTCCCGA ACCCCGAAGC CGAGGTGATG CCCGGTCAGT TCGTCCGGGC CAAGGTCCTC
GGCCTCGTGC TCAAGAACGC CATCATCGTG CCGCAGCGTG CCGTTCTCGA AACCCAGAAG
GGCCCCATGG TCTATGTGGT CGGTTCCGAC ATGGTCGCCA ACCTGCGCCC CGTGGTCGTG
GCCGAGGCTC TCGGCGGCGA CTATCTCATC GAGAAGGGCC TTTCGGGCGG CGAGACCATC
ATCGTGGAGG GCATCATCAA GGCGCGACCC GGCCAGCCCG TGCGCGTGGC CCAGCCCGCC
AACGGGGCCG CCCCCGCAGC CGCCCAGCCC GGCGCAGCCA GCTAG
 
Protein sequence
MALRFFMGQR VLPFVLVVAM MAALTGCKEE AQKGAPPAPL VEVKTITAGD VPVTSEYVAQ 
TAGSREVEVR ARVTGILLKR TYTEGRPIKK GALMFEIDPD TYKAALDQAE GQLAQEQARL
SRARLERDRV LALYADNAVS QKDRDDAVTE FDSASAAVKV AQARVKEARI NLGYTRVDAP
IAGVTSKEVR SEGSLVSPSA DGSLLTTITR LDPLYVNFGV PGTEMSSLRR LIESGKAEMP
ADGLAVQLTL PDGTVYARTG KITFTDKQVD QTTGTVRSRA EFPNPEAEVM PGQFVRAKVL
GLVLKNAIIV PQRAVLETQK GPMVYVVGSD MVANLRPVVV AEALGGDYLI EKGLSGGETI
IVEGIIKARP GQPVRVAQPA NGAAPAAAQP GAAS