Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_2900 |
Symbol | |
ID | 4664919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 3392331 |
End bp | 3395471 |
Gene Length | 3141 bp |
Protein Length | 1046 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639821161 |
Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
Protein accession | YP_968338 |
Protein GI | 120603938 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCTCTC GCTTTTTCAT CATGCGGCCC ATCTTCGCCA CGGTCGTCTC GCTGGTCATC ATACTGGCGG GCTTCATGGC GATGCGCGGG CTGCCCATCG CACAGTATCC CGACATCATC CCGCCGCAGG TCGAGGTCGA GGCCACCTAC TCCGGGGCCA GCCCCGAGGT CGTGGCCGCC ACCGTTGCCG CGCCGCTCGA ACAGCAGATC AACGGCGTGG ACAACATGCT GTACATCAAC TCCACCAGTT CGAGTACAGG CACCATGAAC CTCATGGTGA CGTTCGAGGT GGGGACCGAC CCCGACCAGG CGACCATCAA CGTCAACAAC CGGGTGCAGG CCGCGTTGCC GCAGCTGCCC GAAGACGTGC GCCGCCGCGG CGTCACGGTG ACCAAGAAGT CGTCGAACAT GCTTCAGGTC ATCTCCATGA ACTCGCCCGA CGAGCGGTAC GACACCATCT ACATCAGCAA CTATGCGCTG GTGAACGTCA TCGATGAACT GCGCCGTCTC AAGGGCGTGG GTGACGTGGT GCTGTTCACG GCGCAGGACT ACTCCATGCG CGTGTGGTTG CAGCCCGACA AGATGGCCCA ACTGCGCCTC ACGCCTTCCG ACGTCATCGG TGCCATCCAG GAGCAGAACG CCCAGTTCGC CGCCGGTCGC ATCGGGCAGC AGCCGCTGCA CGACCCGGTC GAACTGACCT TCATGGTCAA CACCAAGGGG CGCCTCTCCA CCCCTGAAGA GTTCGAGAAC ATCATCCTCC GCGTCGAGGA GGACGGCTCG ACCCTCAAGC TCAAGAGTGT GGCCCGCGTC GAACTCGGCG CCAAGGACTA CAACTTCATG GGCAAGGAGA ACGGCAAGCC CACGGTTCCC ATCGGCATCT TCCTCGCGCC GGGGGCCAAC GCGCTTGAGA CGGCAGACCG TGTCAGCGCG GCCATGGCCG AGATGTCGCT GCGTTTCCCC GATGGTGTGA GCTATTCCAT ACCGTACGAC ACCACCAAGT TCGTGCGCGT CTCCATCGAC GAGGTGGTCA AGACGCTGTT CGAGGCCATG GTGCTGGTGT TCATCGTCAT CTACCTGTTC CTGCAGAACT GGCGTGCCAC CATCATTCCC TGCCTCGCCG TCCCGGTGTC GGTCATCGGT GCGTTCGCGG GCATGTACAT GCTCGGCTTC ACCATCAACA CGCTGACCCT CTTCGGTCTG GTTCTTGCCA TCGGCCTCGT GGTCGACGAC GCCATCATCG TGCTCGAGAA CGTCGAGCGC ATCATGGCCG AAGAGCACCT GCCGGTGAAA CAGGCCACCA TCAAGGCCAT GCACGAAGTG GCCAGCCCCA TCGTCGCCAC CGTGCTGGTG CTGTGCGCGG TGTTCATCCC CGTCGCCTTC GCGGGCGGCC TCGCGGGGCA GATGTACAAG CAGTTCGCCA TCACCATCGC GGTGTCCATG GCCATCTCCG GCCTTGTGGC GCTGACCCTT TCGCCCGCCC TGTGCGCCAT GTTCCTGAAG CCGGGCCATC AGGAGCCCAA CAGGTTCTTC CGCTGGTTCA ACAACTGGTT CGAAGGCGTC ACCAACCGCT ATACGGCGGG CGTCACGTTC CTGCTCAAGC GCATGGCGCT GGGCCTTGTG CTCTTCGCCG GGTTGTGCGG TGTGACGTGG CACCTGTTCA GTATCGTGCC CGGCGGCCTC GTGCCCGACG AAGACCAGGG GTATGTCATG GCCATGGCCA TCCTGCCCGA CGGTTCGGCC CTCAACCGCA CGGAAGTGGT CACCGACCGT CTTGCCAAGG CGGCCTCCAA CGACTCCAGC GTACAGAGCG TCATGGCCTT CACCGGCTAC GATGCGGTCT CCGGCACCAA CAAGCCCAAC ACGGGCTTCA GCTGGATCAT GCTGAAGCCG TGGGAAGAGC GCAAGGAGGA GTCGGAATCG TCATACTCGG TGGTGCAGCG CATCTTCAGG GAAGGTGCGG GCTATACCGA GGGCGTCGTC ATCGCCTTCA ACCCCCCGCC CATCTCGGGC ATGAGCACCA CGGGCGGCTT CGAGGTGTAC CTGCAGAACC GTGGCACCGG CGACAGCAAG GAGCTTGCGG CCATGGTGCA GAAGTTCGTT GGCGCGGCCC AGAAGCGTCC TGAACTTGCA GGCGTCTCAT CCACCTTCGG TGCCAATACC CCGCAGCTCT TCGTGGAACT CGACCGTAAC CGCGCCAAGG CGCTGGGCGT GTCCATCAAT GAGCTGTTCG CCACCATGCA GTCGACGTTC GGAACCTACT ACGTCAACGA CTTCAACAAG TTCGGGCGTA CGTTCATGGT CATGGTGCAG GCAGATGCCC AGTACCGCGA CAACCCCGAC GACCTCACGA AGGTCTACGT GCGCTCGAAC AAGGGCGACA TGATCCCGCT CGCCTCGCTC ATCAAGGTGG AGCGCATCAC GGGGACGGAA GTCGTTGAGC GCTTCAACGT GTTCCCCGCC GCGAAGATCG TGGGCGGCCC TGCCCCCGGC TACAGTTCGG GACAGGCTCT TGCTGTCATG GAGGAGCTCG CCGCCGAGGT GCTGCCCGCC GAGTATTCCC TCGGCTGGAT CGGCTCGGCC TATCAGGAGC GCCTCACGGG CGGTACCTCG TTCATGGTGT TCGCCCTCGG CCTCGTGATG GTGTTCCTCA TCCTCGCGGC GCAGTACGAG AAGTGGTCGT TGCCCCTGGC GGTCATCATG ATCGTGCCCT TCGCCCTGTT CGGTGCCATG GCCGCCACAT GGCTGCGTGG CCTCGACAAC GACGTGTACC TTCAGGTCTC GCTGGTGACA CTCATCGGCC TTGCGGCCAA GAACGCCATC CTCATCGTGG AATTCGCCAT GATGCAGGTG CATGAGGGCA AGGGCATCGT CGAATCGGTG ACCGAGGCGG CACGACTGCG TTTCAGGCCC ATCATCATGA CGTCCATGGC CTTCGTGCTG GGCTGCGTGC CGCTGGCCAT CAGCTCGGGT GCTGGCGCGG CAGGACGGCA CGCCATCGGT ACCGGCATCA TCGGCGGCAT GCTGGCGGCG ACCTTCATCG CCACCTTCTT CATTCCGCTG TTCTTTAGGC TTATCATGGA ACTGAGCGCC CGTTTCACCG GCGGCCATCA GGCTTCCGGC GACGGGGAGG AGGCACGATG A
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Protein sequence | MFSRFFIMRP IFATVVSLVI ILAGFMAMRG LPIAQYPDII PPQVEVEATY SGASPEVVAA TVAAPLEQQI NGVDNMLYIN STSSSTGTMN LMVTFEVGTD PDQATINVNN RVQAALPQLP EDVRRRGVTV TKKSSNMLQV ISMNSPDERY DTIYISNYAL VNVIDELRRL KGVGDVVLFT AQDYSMRVWL QPDKMAQLRL TPSDVIGAIQ EQNAQFAAGR IGQQPLHDPV ELTFMVNTKG RLSTPEEFEN IILRVEEDGS TLKLKSVARV ELGAKDYNFM GKENGKPTVP IGIFLAPGAN ALETADRVSA AMAEMSLRFP DGVSYSIPYD TTKFVRVSID EVVKTLFEAM VLVFIVIYLF LQNWRATIIP CLAVPVSVIG AFAGMYMLGF TINTLTLFGL VLAIGLVVDD AIIVLENVER IMAEEHLPVK QATIKAMHEV ASPIVATVLV LCAVFIPVAF AGGLAGQMYK QFAITIAVSM AISGLVALTL SPALCAMFLK PGHQEPNRFF RWFNNWFEGV TNRYTAGVTF LLKRMALGLV LFAGLCGVTW HLFSIVPGGL VPDEDQGYVM AMAILPDGSA LNRTEVVTDR LAKAASNDSS VQSVMAFTGY DAVSGTNKPN TGFSWIMLKP WEERKEESES SYSVVQRIFR EGAGYTEGVV IAFNPPPISG MSTTGGFEVY LQNRGTGDSK ELAAMVQKFV GAAQKRPELA GVSSTFGANT PQLFVELDRN RAKALGVSIN ELFATMQSTF GTYYVNDFNK FGRTFMVMVQ ADAQYRDNPD DLTKVYVRSN KGDMIPLASL IKVERITGTE VVERFNVFPA AKIVGGPAPG YSSGQALAVM EELAAEVLPA EYSLGWIGSA YQERLTGGTS FMVFALGLVM VFLILAAQYE KWSLPLAVIM IVPFALFGAM AATWLRGLDN DVYLQVSLVT LIGLAAKNAI LIVEFAMMQV HEGKGIVESV TEAARLRFRP IIMTSMAFVL GCVPLAISSG AGAAGRHAIG TGIIGGMLAA TFIATFFIPL FFRLIMELSA RFTGGHQASG DGEEAR
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