| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2893 |
|---|
| Symbol | |
|---|
| ID | 4664904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | + |
|---|
| Start bp | 3385129 |
|---|
| End bp | 3386664 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639821154 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_968331 |
|---|
| Protein GI | 120603931 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2403] Predicted GTPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.864733 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGACG CTGCGATTGT CACCGGCAGG CCGACACCCC CGGAATCCCC AGGCGCTGCC
GACCTGCACG GCAGAGACCG GCACCAAGAG GGCCCGCGCA ACGTGGTCAT CATGGGGGCG
GCAGGGCGCG ACTTCCACAA TTTCAACATG CTCTACCGGC ACGCGCCCGA AGTGAGGGTG
CTGGCCTTCA CAGCCGCGCA GATACCCGAC ATCGCGGGCC GCAACTACCC CGCGGTGCTT
GCGGGCCCCG CCTACCCCGA GGGTATCCCC GTCATCGCCG AAGAGGAACT TTCCACCTAT
TGCCTCGGCG TGCGTCTCGA CGAAGTGGTC TTCGCCTACA GCGACGTGTC CCACGAGGAG
GTCATGCACA AGGCTTCGCG TGCGCTGGCC TGCGGTGCCG ACTTCACGCT GGTCTCGCCC
TCGCGCACCA TGCTGGTCGC CCATCGGCCC GTCGTGGCCG TGTGCGCGGT GCGCACGGGG
TGCGGCAAGT CGCCCGTGAC GCGCCACGTG GCCGACACGT TGCGGCACGA GGGGTTGCGT
GTGGTGGTGG TACGGCATCC CATGCCCTAC GGCGACCTCG CTGCGCAGGC GGTGCAGCGT
TTCGCCTCCG TACAGGACAT GGACGACGCA CGCTGCACCA TCGAGGAACG CGAAGAGTAT
GAACATCTCG TCGAAGCCGG ACTGGTGGTC TACGCCGGGG TGGACTACGA ACGCATCCTC
GCCCAAGCCG AAGCCGAGGC CGATGTCATC ATCTGGGACG GCGGCAACAA CGACACGCCA
TTCTTCCGGC CCGACGTGCA CATCACCCTG TGCGACGCGC TGCGCCCCGG TCATGAGGTC
GGCTACCATC CGGGCGAGAC CAACCTGCGC ATGGCGCACA TCGTGGTGGT GAACAAGGCC
GACGATGCCA GACCTGAACA GGTGGCCCGC GTCTGCGTCA ACGCAGCCGC CGCCAATCCC
GGCGCCCTGC TGCTTGGCGG GGCCTCACGC GTGACGGTCG ACACCCCCGA CGCCATCGCT
GGCAAACGCG TCCTCGTGGT GGAGGACGGC CCCACCCTCA CCCATGGCGG CATGCCCTTC
GGGGCCGCCA GCGTGGCCGC ACGCGTCTTC GGCGCGGCAC AGACCGTCGA CCCGTGGCCC
CATGCCGCAC CGTCGCTACG GGCCACCCGC GAAGCCTATC CGCACCTCGA CCGGGCCCTG
CCCGCCATGG GCTATTCGCC GGAACAGGTG CGCGACCTTG CCGACACCAT CTCCGCCACA
CCCTGCGACC TCGTCCTTTC GGGTACGCCT GTCGACCTCG CAAGGCTCAT CGTCATGACG
CGCCCACACC TGCGGGTGCG CTACACGTTC GAGGACGCAC CTCTCCCCTG TACGACCGGG
GCACCGACTG AGACGTGGGG TAACACCCCC GACACGCCCG AGCCCCCCCG AAGGCCCGAC
AGGCACGGCA TCGCAGAAGG GACAGGGCTG CGGACGACGC TGGCACAGGC CGTACTCGAC
CGTATCATGC CGCTGGTGCG AAAGGGCATC GATTGA
|
|---|
| Protein sequence | MKDAAIVTGR PTPPESPGAA DLHGRDRHQE GPRNVVIMGA AGRDFHNFNM LYRHAPEVRV
LAFTAAQIPD IAGRNYPAVL AGPAYPEGIP VIAEEELSTY CLGVRLDEVV FAYSDVSHEE
VMHKASRALA CGADFTLVSP SRTMLVAHRP VVAVCAVRTG CGKSPVTRHV ADTLRHEGLR
VVVVRHPMPY GDLAAQAVQR FASVQDMDDA RCTIEEREEY EHLVEAGLVV YAGVDYERIL
AQAEAEADVI IWDGGNNDTP FFRPDVHITL CDALRPGHEV GYHPGETNLR MAHIVVVNKA
DDARPEQVAR VCVNAAAANP GALLLGGASR VTVDTPDAIA GKRVLVVEDG PTLTHGGMPF
GAASVAARVF GAAQTVDPWP HAAPSLRATR EAYPHLDRAL PAMGYSPEQV RDLADTISAT
PCDLVLSGTP VDLARLIVMT RPHLRVRYTF EDAPLPCTTG APTETWGNTP DTPEPPRRPD
RHGIAEGTGL RTTLAQAVLD RIMPLVRKGI D
|
|---|
| |