| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2870 |
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| Symbol | |
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| ID | 4664742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 3345745 |
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| End bp | 3349062 |
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| Gene Length | 3318 bp |
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| Protein Length | 1105 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639821126 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_968308 |
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| Protein GI | 120603908 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.719713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.347802 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGAGA CACCGGATGT CTGCGCAGGT CGGTCGGGGG AAAACGGCAC GCGCGACAGT
ATCGGAACAT CGCCGCTGGT CATGCCGGAG GGCACGGTCT GCACGCCTGA CATCGCAGTA
CCAGACAAGA CGCCTTCCGC GGCGGGCCTG TCGGCACTCC ACGGACATGT CCTTGATGCC
GACCCCACAC CCCGCTTCGT TCTCGACGAC CACCTACACC TCGTGCTGCT CAACCCTGCA
CTGGCCGACC TGATTTGCCA CGACGCCATC GGTCGCCACG GCAACGCGGC CGGACCATCA
CCGGACACCC TCACGGGACG ACATATCGCA GAGGTTTTCA CGCCCGACGC CTTCACCCAG
ATGGCAACGG CACTCGCCGA TGTCCAAAGC GGCCTGAGTC CGGTGCACTC GCTGCTCATC
AAGCGGGCTG TGGGCGACAG CTACCTCCGT CTGCGCATCT TCCCGGTGCC CCATGGGGGC
AGGACCTTCA TCGCGGGAGA CCTCGCCCCC GCCGACACAC CCTGCCGCAG CGAGTTGCAG
ATGTTCGAGC AAGAGGCCAC ACTGCGCGCC ATTGGCGACA ACCTGCCCGA CTGCGCCATC
TTCTCGCAAC GCGTGCTTCC CGACGGCACC ATCATCCCGC GCTACCGCAG CCGCAGCGTA
TCCTCACTCT TCGGCATCCC CTTCGAGATG GCCATGAACG CGCAAGAACT TCTGCGACTG
GTGGTCGTCC CTGAAGACAG TCACATGTTC GACGCCAACG CCATTCAGGC GCAGGGTTCC
TTTCACGGGG CCATACGTAT CCGCCGCATG AACGACGGGG CCATGCGCTG GATACAGGTG
CACGCCGCCG CGCGCCCGCA GCCCGACGGC AGCAGCATCT GGGACGGCAG CGTCAGCGAC
ATCACCCATC TCAAGAAGCA GGAACGTTCA CTACGTGAAC GTGACCTCAC CATCCGTTCC
ATCGGCGACA ACATGCCCGA CGGCATGCTC TTCAGCGTGG ACGCACCACC TGACGGCCCG
CACAGGTACA CCTACGTCAG CCGGGGCGTC GAACGCCTCT TCGGCCTTTC CGCCGAAGCG
GTCCTCGCAG ACCCGCGTGC CCTTGAAGCC CTTGTCGTCC CCGAGGACAG GTCTCGCCAT
ACCGCCCTGC AACAACACGC CATCCGCACC CGCACCCCGT TCGACATGAT GCTGCGTATC
GCCGTGGCGG ATGGCAGCCG CCGCATCTTC CATGTGCGTG CCAAACCCCG CCATGACGAC
GGAAGCAGCC ACGCATGGGA CGGGGTCTGC ACCGACGTGA CAACCGCCGT CGAACAGCAG
CACGCCCTGC GTGAACGAGA GAGCATGCTC GCCGCCATCG GCGACAACCT GCCGCACGGC
GGCATCTTCC GGGTCTCGCT GGACGCACAG GGACTGCGGT TCATGTACGT GAGTCAGGGA
ATCGAGAGAC AACTCGGCAT CAGGCCAGAG TCACTCTACA AAGACAGTTC CGTCCTTCTG
GCCAGGTTCG ACAGGAACGA CCGCGCCCTT CTCCGCGAAG CCTGCCAGCG CTGTCTGGAC
GACGGCACCC CCGTCGACAT CACCGTACGC TACACCCACG TCTCCGGGCG CATCCACTGG
CTTCACCTGC GCATGGCCCG TCATACGGCA GACAGGGCGT GCCGGATACT GGACGGCCTC
GCCATCGACG AGACCCAACT CGTACTGCAA CGCGATGCCC TGCGGGAGCA TGAACGCATT
CTCACTGCCC TCGGGGACAG CCTGCACGAG GGGGCCATCT ACACCTGCGA GGTGTTGCCG
GAGGGAACCA GCCGCCTTCT CTATGCCAGC AGCCAGGCTG GCAGGCTGAT GGGCGTTCCC
ATCCAGCGCC TCTACGACGA CTTCGACGCG GTCGTCGCCG AACGCATCCA CCCGGACGAC
CTCGAAGGGC TTGCCAAGGC AGAATGCCAC GCCCAGATGA CGCTCGAACC GCTCGACCTG
CGCTTGCGCA TCCTCGCCGA TGAAGGAGAG GTGCGCTGGC TGCATGTGCG CTCCGCCCCT
TCCCCAAGGG CGGGAGGCGG CTTCCTGTGG CAGGGCGTGG TACTGGACAT CACCGCGCTC
AAGCGCACTG AAATCGCGCT GGAGACGACC CGACGCCACC TGCATGACAT CATCGAGGCC
ATGCCCTCGG CCCTGTTCGG CATCGACGCC GATGAGAACG TCACCTGCTG GAACGCCGCG
GCCCGACGGC TGCTCGGCTT CGGTGACCCC AGACCGCACG AAAGGGCAAC GGCCTCGCCA
ACTGGCGATG GAGAGCCTCG CGAGCATCCC GTGATGCCGC TCACCAGCCT GCCGCGTCTT
GCCCCTTATG CTGCACTGGT GCGCACATCG CTTGCCAGCG GCACGACATT GCGGGCCGAA
CGCACGGCCC TGCGCCTCGA CAGCGGGCAA CGCTTCGACG ATGTGGTCGT CTACCCGTTG
CAGGATGCCC TGAAAACGCA CAGGGGCGAA GCCATGCTCC GGCTTGATGA CGTCACCGAC
AGGGTCCGCC TTGAGGAGAT GGTCGTACAG AACGAAAAGA TGCTTTCCAT CGGGGGGCTT
GCGGCAGGCA TGGCGCATGA GATCAACAAC CCCCTCGCGG GGGTGTTGCA GGGTGTGCAG
AACGTACGAA GGCGCTTCTC GCCGACGCTT GCTGCCAACG CCGCCGATGC AGAGGCCTGC
GGCCTGTCGC TGGAGGCCAT GCAGCAATAT ATGCAGCGAC GCGGCATCCT GTTTCTTCTG
GACGGCATCC GCGAATCGGG CGAACGCGCG GCGCGCATCG TGCGCAACAT GCTGGAGTTC
AGCCGTCGCA GTTCGCTCGA AAAGATACCC ACCGACCTCA ACGCCCTGCT GCACAAGGTC
GTAGAGTTCG CCTCTGCCGA CTTCGACATC CACGACGACT ACGATTTCAA ACGGGTGCGC
ATCCTCTTCG AGACGCAACC CGACCTGCCG CCCATTCTCT GCGCCCCCGG GGAGATGGAA
CAGGTTCTCG TCAACCTCGT GCGCAATGCA CTGCACGCCA TGGCGGCAGT CCGTAGTGCC
ACCCCGACCA TCACCCTGCG CAGCCGCCGC ACGGAGAAGG GCGTACGCAT CGAGGTCGAA
GACAACGGCC CCGGCATGTC TGAAGACGTC CGTCGCAAGG TGTTCGAACC GTTCTTCACC
ACGAAGGCTC CCGGCAAGGG GACGGGGCTG GGCCTTTCGG TCTCGTATTT CATCGTCACG
CGCTTTCACA AGGGGCTGCT GCGCGTGGAG TCGGCCCCCG GCGAAGGCAC CCGGTTCATC
ATCGAACTTC CCGCCTAG
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| Protein sequence | MGETPDVCAG RSGENGTRDS IGTSPLVMPE GTVCTPDIAV PDKTPSAAGL SALHGHVLDA
DPTPRFVLDD HLHLVLLNPA LADLICHDAI GRHGNAAGPS PDTLTGRHIA EVFTPDAFTQ
MATALADVQS GLSPVHSLLI KRAVGDSYLR LRIFPVPHGG RTFIAGDLAP ADTPCRSELQ
MFEQEATLRA IGDNLPDCAI FSQRVLPDGT IIPRYRSRSV SSLFGIPFEM AMNAQELLRL
VVVPEDSHMF DANAIQAQGS FHGAIRIRRM NDGAMRWIQV HAAARPQPDG SSIWDGSVSD
ITHLKKQERS LRERDLTIRS IGDNMPDGML FSVDAPPDGP HRYTYVSRGV ERLFGLSAEA
VLADPRALEA LVVPEDRSRH TALQQHAIRT RTPFDMMLRI AVADGSRRIF HVRAKPRHDD
GSSHAWDGVC TDVTTAVEQQ HALRERESML AAIGDNLPHG GIFRVSLDAQ GLRFMYVSQG
IERQLGIRPE SLYKDSSVLL ARFDRNDRAL LREACQRCLD DGTPVDITVR YTHVSGRIHW
LHLRMARHTA DRACRILDGL AIDETQLVLQ RDALREHERI LTALGDSLHE GAIYTCEVLP
EGTSRLLYAS SQAGRLMGVP IQRLYDDFDA VVAERIHPDD LEGLAKAECH AQMTLEPLDL
RLRILADEGE VRWLHVRSAP SPRAGGGFLW QGVVLDITAL KRTEIALETT RRHLHDIIEA
MPSALFGIDA DENVTCWNAA ARRLLGFGDP RPHERATASP TGDGEPREHP VMPLTSLPRL
APYAALVRTS LASGTTLRAE RTALRLDSGQ RFDDVVVYPL QDALKTHRGE AMLRLDDVTD
RVRLEEMVVQ NEKMLSIGGL AAGMAHEINN PLAGVLQGVQ NVRRRFSPTL AANAADAEAC
GLSLEAMQQY MQRRGILFLL DGIRESGERA ARIVRNMLEF SRRSSLEKIP TDLNALLHKV
VEFASADFDI HDDYDFKRVR ILFETQPDLP PILCAPGEME QVLVNLVRNA LHAMAAVRSA
TPTITLRSRR TEKGVRIEVE DNGPGMSEDV RRKVFEPFFT TKAPGKGTGL GLSVSYFIVT
RFHKGLLRVE SAPGEGTRFI IELPA
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