Gene Dvul_2867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2867 
Symbol 
ID4664722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp3339479 
End bp3340516 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content61% 
IMG OID639821123 
Productextracellular solute-binding protein 
Protein accessionYP_968305 
Protein GI120603905 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0687] Spermidine/putrescine-binding periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAGAC TGCTTGCGAC CGTCGTCATG CTGCTGCTCT GGACCGGCGT CGCCGTCAGT 
GCCGAGCCCA AGGTGCTCAA CGTCTTCAAC TGGTCGGAAT ACGTTCCGCA GACGGTGCTC
GACCGCTTCA CCAAGGAGAC GGGCATCAAG GTGGTGTACA CCACCTACGA ATCGAACGAG
GCCATGTACG CCAAGATCAA GCTCTTGCGC GGCAAGGGCT ACGACATCGT GGTGCCCTCC
ACCTACTTCA TCGACATGAT GCGCAAGGAC GGCCTGCTGG CGAAAATCGA CAGGGCCAAG
CTCACCAACT ACGCCAACCT CGACCCGCGT GTGCTGCACC AGCCCTTCGA CCCGCAGAAC
GAGTTCAGCG TGCCCTACAT GTGGGGCAAC ACCGGCCTGA TGGTGAACCG CAAGGTCGTC
GACCCTGCCA CCATCTCCAG CTGGAACGAC CTCTTCCGCC CCGAGTTCAA GGGTGGGGTC
ATCCTCTCCG ACGACCTGCG CGACACCTTC GGCATCGCGC TGAAGGCGCT TGGATACTCG
GTCAACTCCA CCAGCGAAGC CGAGATAAAG GCCGCCTACG AATGGCTGCT CAAGCTGAAG
CCCTCGGTAC GCGTCTTCGA CGTGACCGCC ACCAAGCAGG CGTTCATCGC CGAAGAAGTG
AAGGGCGGCA TGAGCTGGAA CGGTGACGCC TTCATCGCCA TGAACGAGAA CCCCGACCTC
GCCTTCGTCT ACCCGAAGGA AGGCCTGCCG CTGTGGGTGG ACAGCCTTGC CATCCCCATC
GGGGCCGAGC ACAAGGACAA CGCCCACAAG TTCATCGACT TCCTGCTGCG CCCCGACATC
GCCAAGCTGT GTGTCGAGGA ATACAACTAC TCGACGCCCA ATCTCGCGGC CCAGAAGATT
CTCGACGCCA AGCACGCGCA AAGCCGCGCC ACGTCGCCCA CCGACGCCGA CCTGAAGAAC
TCCGAGTTCA CCAACGGCGT GGGCAAGGCA CTCGACGTAT ACGAGAAGTA CTGGGAAATG
CTGAAGACCG CCGACTAG
 
Protein sequence
MQRLLATVVM LLLWTGVAVS AEPKVLNVFN WSEYVPQTVL DRFTKETGIK VVYTTYESNE 
AMYAKIKLLR GKGYDIVVPS TYFIDMMRKD GLLAKIDRAK LTNYANLDPR VLHQPFDPQN
EFSVPYMWGN TGLMVNRKVV DPATISSWND LFRPEFKGGV ILSDDLRDTF GIALKALGYS
VNSTSEAEIK AAYEWLLKLK PSVRVFDVTA TKQAFIAEEV KGGMSWNGDA FIAMNENPDL
AFVYPKEGLP LWVDSLAIPI GAEHKDNAHK FIDFLLRPDI AKLCVEEYNY STPNLAAQKI
LDAKHAQSRA TSPTDADLKN SEFTNGVGKA LDVYEKYWEM LKTAD