Gene Dvul_2866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2866 
SymbolpotC 
ID4664721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp3338704 
End bp3339477 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content64% 
IMG OID639821122 
Productspermidine/putrescine ABC transporter membrane protein 
Protein accessionYP_968304 
Protein GI120603904 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCATGC GTCGTCTCGG CATGGCGTGG GTATGGCTGG TCTATGCCTT CCTGTACCTG 
CCCATCCTCG TGGTCATCGT CTATTCGTTC AACGCCTCGA AGTACTCCAC GGCGTGGAGC
GGTTTCACCC TCGACTGGTA CGCGAAGCTG CTCGCCAACA CGCCCCTCGT CGACGCGGCC
CTGAATTCGC TCTCGGTGGC CACACTCTCG GCCACGCTCG CCACCCTTCT GGGCTCGCTG
GCGGCCATGT GCCTGCACCG CTACCGCTTT CCGGGGCGCA AGGTGCTGCA CAGTTCCATC
TACGTGCTCA CCGTGTCGCC TGACATCGTC ATGGGCATCT CGCTGCTCAT CTTCTTCATC
GCGTTGCGCA TGGAGCTCGG CTTCGTCACC CTGCTCATAG CGCACACCAC GCTGGGCCTG
CCCTTCGTGA CCGTGACGGT GCTGGCGCGC CTCGCCGAGT TCGACGAGCA CCTCGTGGAG
GCCGCGCGCG ACCTCGGTGC CTCGGAAGCC GCAGCCTACC GCCACATCAT CCTGCCGCTC
ACCCTGCCCG CCGTGGCCGC CGGATGGCTG CTGTCGTTCA CCCTCTCCAT GGACGACGTG
CTCATCAGCT TCTTCGTCAC CGGCCCCTCC TTCGAGGTGC TGCCGCTGAA GATCTATTCC
ATGGTCCGTC TTGGCGTGAA GCCCGACATC AACGCGCTCT CGGCCGTCAT GTTCGGGGTA
ACCATCGTAC TGGTCCTGCT GGCGCAGGCC CTGACCAACA TGAGGAGGAA GTAG
 
Protein sequence
MFMRRLGMAW VWLVYAFLYL PILVVIVYSF NASKYSTAWS GFTLDWYAKL LANTPLVDAA 
LNSLSVATLS ATLATLLGSL AAMCLHRYRF PGRKVLHSSI YVLTVSPDIV MGISLLIFFI
ALRMELGFVT LLIAHTTLGL PFVTVTVLAR LAEFDEHLVE AARDLGASEA AAYRHIILPL
TLPAVAAGWL LSFTLSMDDV LISFFVTGPS FEVLPLKIYS MVRLGVKPDI NALSAVMFGV
TIVLVLLAQA LTNMRRK