Gene Dvul_2858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2858 
Symbol 
ID4664710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp3328264 
End bp3329100 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content68% 
IMG OID639821114 
ProductABC-3 protein 
Protein accessionYP_968296 
Protein GI120603896 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.997835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTTCGT CACCGTTCGA TCATGCCTTC ATGCTCCATG CCCTTGCCGC AGGCGCCCTC 
GCCGGAGTGG CCTGTTCCGT GGCGGGGGTC TTCGCCGTGC TGATGCGGCT GACGTTCATC
GGGGTGTGCC TCGCCCATGC CGCGTTCGCC GGAGGCTTGC TGGCACTGGC CTTCGGACTG
CCCTCGCTGC CCGCAGCCCT TGCCAGCAGC ATGGTCGCCG CACTGGTGGT CGGGCCACTG
GCTGACAGGG GTGAGATTTC GCCCGACACC GCCGTGGGTA TCGTCTTCTC GGCCATGATA
GGTGTCGCCG TCCTGTGCAT GGGGCTGTTG CCCGGCCCCA AGACCGAGGC CCTGAACCTG
TTCTGGGGGT CGATACTCAC CGTGCGCCCC CGCGACGTGT GGCTGCTTGC GGCGGTGGCG
GGAGTCGCCG TCGTGGGTGT CGCGGTGTTC TTCAAGGAAG TGCAGGCGGT GGCGTGCCAC
CGTTCTGTGG CCGCTGCCGT GGGCATACCC GCCACGGCGG TGTTCTACGC CATCCTGCTG
CAGACCGGGG TGACGGTCAC GGCGTGCCTG CCCAGCGTGG GCGGACTGCT GGTCTACAGC
CTTCTGGTGA GCCCCGCTGC CGCAGCCTAT CAGCTCACCT ACAGCCTCGG GCGCATGTTC
CTGCTGGCGA TGTTCTTCGG AGCCCTGTCG GGAGTGGGGG GAGTGCTGGT GGCGTGGTAT
CTCGACGTGC CAGCCGGGGC GGCGGTGGTG CTCTTCTCTT GTGCGCTGTT CCTGCTGGCC
GCGTGGTTCT CGCCCAAGCG AGACCGGGCT GCGCGGTCGG CCTCTTCGAG GCGTTGA
 
Protein sequence
MGSSPFDHAF MLHALAAGAL AGVACSVAGV FAVLMRLTFI GVCLAHAAFA GGLLALAFGL 
PSLPAALASS MVAALVVGPL ADRGEISPDT AVGIVFSAMI GVAVLCMGLL PGPKTEALNL
FWGSILTVRP RDVWLLAAVA GVAVVGVAVF FKEVQAVACH RSVAAAVGIP ATAVFYAILL
QTGVTVTACL PSVGGLLVYS LLVSPAAAAY QLTYSLGRMF LLAMFFGALS GVGGVLVAWY
LDVPAGAAVV LFSCALFLLA AWFSPKRDRA ARSASSRR