| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2848 |
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| Symbol | |
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| ID | 4663982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 3316741 |
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| End bp | 3317646 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639821104 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_968286 |
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| Protein GI | 120603886 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGCCC CCATTCCCAC CCGGTCGGTG AAGTTGTCTC AATCGCCCTG TGCGGCAGAT
TCGAGTGAAT CGGCCCATCG CGTCCCGTTC CGTATCCCTG AACGGCTGTA CGGCATCGTC
GGGCATCCGC TCGGCCATAC CCTGAGCCCG TTGCTGCACA ACTGGGGCTT CGCCCTGCAC
AGCCTGCCTG CGGTGTACAT GGCGTGGCCC GTGCCGCCGG GGAGGTTCGC GTCGTTCATG
GAGGCTGTGC GCACGCTGCC CGTGCATGGT GCCAGCGTCA CCATCCCCCA CAAGGAGGAG
GCCTTGCGCC TGTGCGACCG TGTCACGGAC AGGGCGCGGG CGGTGGGGGC GGTGAACACA
CTCTTTCTTG AAGGCGGGGT CGTGTGCGGC GAGAACACCG ATGTGACAGG CTTTCTCGCC
CCGTTGCGTG CCCGTGGCGT ACGCATCGAC GAAGCCCTCG TGCTGGGTGC GGGCGGTGCT
GCGCGCGCCG TGCTGGCGGG CCTTGTCGAA CTGGGGGTGC GCCGGGTGCG CATCTCCAAC
CGTACCCACG ACAAGGCCAT GGAACTTGCC GGGGCGTTCG GTGCCGATGT CGTGCCGTGG
GATGAGCGCG GGAGTGCCGC CGCGGGGCTT GTGGTCAACA CCACCCCGTG CGGGATGCAG
GGCGCACGCA TGGGCGAGTC GCCCTTGCCG GACGGGGCGT TCACCGGGCG TGGCATGGCC
TACGACCTTG TGTACAACCC CCTCACGACG CGCTTTCTCG CCGATGCGCG TGCGGCAGGG
TGGGAGACGC AGGACGGGCT TGGCATGTTC GTGGAACAGG GGCGCGAGCA ATTCCGCATC
TGGACGGGAC TGGACCTGCC TGCCGAGGGG GCGCGTCGTC TGATTGCGGA AGCCCTCGGG
CTGTGA
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| Protein sequence | MSAPIPTRSV KLSQSPCAAD SSESAHRVPF RIPERLYGIV GHPLGHTLSP LLHNWGFALH
SLPAVYMAWP VPPGRFASFM EAVRTLPVHG ASVTIPHKEE ALRLCDRVTD RARAVGAVNT
LFLEGGVVCG ENTDVTGFLA PLRARGVRID EALVLGAGGA ARAVLAGLVE LGVRRVRISN
RTHDKAMELA GAFGADVVPW DERGSAAAGL VVNTTPCGMQ GARMGESPLP DGAFTGRGMA
YDLVYNPLTT RFLADARAAG WETQDGLGMF VEQGREQFRI WTGLDLPAEG ARRLIAEALG
L
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