Gene Dvul_2828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2828 
Symbol 
ID4664636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp3290616 
End bp3292370 
Gene Length1755 bp 
Protein Length584 aa 
Translation table11 
GC content64% 
IMG OID639821084 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_968266 
Protein GI120603866 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTGCG CGATATCGCG CAAGCGAGCC GCAGGGGTAG CCATGCACGC CGAAACAGCA 
GGCGCACCGC GCCATCGCCG CACAGCCGTC AACCGTACCA TCTACGCCGC CATTCTCGTG
GCGTCGGTGA TGCCCATCGC CATCATCCTC GGCGTCATGC AAGTGCACCT CGAGTCGACG
TACAGTGCCA TCGTCAGGCG TGGTTTGCGC GAAATAGCAG ACCGGCACAG TCAGAAGGTC
GATGACTTCC TGCACGAAAG ACTCGCCAGT GTGCAGACGC TGGCCATGTC GCAAGGCGCG
TTGCTCCTCG ACCCCGCGCA GCTTGCCAGC CACCTTGAGA CCTTGCAGCG CGTGCACAAG
GGCGTCTACG TGGACATGGG ACTGGTGGAT GCGAAAGGCA TCCAGCAGGT GTACGCGGGG
CCACTCGACC TGCGCATGGC CGACTACAGC GGCAAGGAGT GGTTCCGTGA GGCCGTGTTG
CGTGATTCGT TCATCAGTGA CGTGTTCATG GGCATCCGGC AGGCACCGCA CTTCATCGTC
ACCACCAAGG TCGTGCTGAA CGGACAGCCG TGGATACTGC GCTCGACCAT AGACTTCGCC
AGCTTCGTGA GTCTTGTCGA GGATATCCGG GTCGGGGCCA CGGGCGTTGC GTGCATCATC
AACCGTCAGG GCGAATTCCA GACGGCGGGC AACCGCCATC CCCTGCCGGA GGGCACGGCA
CTGGCGGCAC AGGCCCGAAG GCTGTTCGGT CCCGGCTTCA CGGCCCGTCC GACAGAACGT
GTCTTCGAGG ACGGCGGCAA CCTCTACGCC ATGTCGTTGC TGAAACATGG CGACTGGGTG
CTGGTGGTGC AGGAACAGCG TGAGGAGGCC CTTGCCGCCC TCGCCGACGC CAAGCAGACG
CTCTTCGCCG TGCTGGTGCT GGTGAGCATT GGTGTCATCG TGGGCGGGGT GCTGCTGGCG
TGGCGCATCA TGGACCGCCT CGACGAGATG GAAAGGGAGA TGGCAGCGCT GAACGCACAG
GTCGTGGAGG CGGGCAAGCT GGGCGCCCTC GGCGAGATGG CGGCTGGCAT CGCCCACGAA
ATCAACAATC CCGTGGCCAT CATGATGGAA GAGGCGGGCT GGATAGAGGA TATCCTTGCC
GACCTTGGCG AGGGCAACCC GGCTGCGCCG GAAATCGCGC GCAGTGCGGC ACAGATACGC
AGTCAGGGCA AGCGCTGCCG CGACATCACC CACAAACTGC TCAGTTTCGC CCGCAAGTCG
GACCGCGACC TGCAACGGCT CGACCTCAAC CATCTCATCC GTGAGCTTGT GGGGCTGTGC
GACCAGCGTG CCGCCTCCGC CGGGGTGACG GTGTCGCTGG CGCTGGTGGA CCAGCTGCCG
GCGGTGTTGG CGTCACCTTC CGAGATGCAG CAGGTGTTCC TCAACCTGTT CAACAATGCC
TTCGACGCCA TGGAAGGCAG CGGGGGGGCG TTGCGGGTGA CATCGGGCGT GGCGGCGGGC
AATATGGTGT TCGTCACCGT GGCGGATACC GGGCCGGGCA TCCCCGAGGC CATCCTGCAA
CGCATCTACG ACCCCTTCTT CACGACGAAG CCCGTGGGCA AGGGCACCGG ACTCGGCCTC
TCCATCTGCT ACGGTATCGT CAAGAAGCTG GGGGGCGAGT TGCGGGTGAA CAGCCTTACG
GGTGTGGGCA CGTCGTTTCA GGTGCTTCTG CCCAGGGCGG GAGAGGGCAT ACAGGCCGTT
GAACGCCATG ATTGA
 
Protein sequence
MSCAISRKRA AGVAMHAETA GAPRHRRTAV NRTIYAAILV ASVMPIAIIL GVMQVHLEST 
YSAIVRRGLR EIADRHSQKV DDFLHERLAS VQTLAMSQGA LLLDPAQLAS HLETLQRVHK
GVYVDMGLVD AKGIQQVYAG PLDLRMADYS GKEWFREAVL RDSFISDVFM GIRQAPHFIV
TTKVVLNGQP WILRSTIDFA SFVSLVEDIR VGATGVACII NRQGEFQTAG NRHPLPEGTA
LAAQARRLFG PGFTARPTER VFEDGGNLYA MSLLKHGDWV LVVQEQREEA LAALADAKQT
LFAVLVLVSI GVIVGGVLLA WRIMDRLDEM EREMAALNAQ VVEAGKLGAL GEMAAGIAHE
INNPVAIMME EAGWIEDILA DLGEGNPAAP EIARSAAQIR SQGKRCRDIT HKLLSFARKS
DRDLQRLDLN HLIRELVGLC DQRAASAGVT VSLALVDQLP AVLASPSEMQ QVFLNLFNNA
FDAMEGSGGA LRVTSGVAAG NMVFVTVADT GPGIPEAILQ RIYDPFFTTK PVGKGTGLGL
SICYGIVKKL GGELRVNSLT GVGTSFQVLL PRAGEGIQAV ERHD