Gene Dvul_2802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2802 
Symbol 
ID4664081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp3258739 
End bp3259725 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content65% 
IMG OID639821057 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_968240 
Protein GI120603840 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.555645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCGT TGCTCGACGT CCAGAACCTC ACCGTCAAGT TCGCTCTCCG CGACGAAGCG 
CTCACCGCCG TGAACGACGT CTCGTTCACG CTGGGCCGTG GCGAACGTCT CGGACTTGTG
GGCGAGTCGG GAGCGGGCAA GTCCGTCACC GGCTTCTCCA TCATCAACCT CATCAGCAAG
CCCGGCTTCA TCGCCGGCGG CTCGGTGCTG TTCGAGGGTA ACGACCTCGT CACCACCGAT
GCCGAAACGT TGCGTGACAT CCGCGGCAAC CGCATCAGCA TGATCTTCCA GGATCCCATG
ATGACGCTGA ACCCGGTGCT CACCATCGGC TCGCAGATGG TGGAGACGAT TCTCGCGCAC
CAGAAGATGA GCCGCCGCGA GGCGGAAGAG ATCGCCCTCG ACAAGCTGCG CAAGGTCTAC
ATCCCCTCGC CCGAGAAGAG GCTCAAGCAG TACCCGCACG AGTTCTCCGG CGGCATGCGC
CAGCGCATCG TCATCGCCAT AGCCCTGCTC ACCTCGCCGA GCCTCATCAT CGCCGACGAA
CCGACAACGG CCCTCGACGT GACCATTCAG GCCGAGATCA TGGACCTGCT GCTTGAACTG
TGCGAGTCCG AGAAGATGGG TCTCATCCTC ATCACGCACG ACCTCGGCGT GGTCTCGCAG
GTGACGCAGA AGATAGCCGT CATGTACGCG GGCCGCATCG TGGAGATGGG CGAGACCGCG
CGCATCGTGG CCGACCCGCA GCATCCCTAC ACCAAGGGGC TGCTCGCCGC CCTGCCGCAG
GGCAACAGCT GTGGCGGCGG CTGCGTGGGC AAGCGGCATC GCCTGAACCA GATTCCGGGT
GCCATGCCCA GCCTCTCCGA GATCGCGCAC GGCATCTGTC CCTTCCACAA CCGTTGCGAG
CTGTGTCAGG ACGTGTGCCG CACCTCGCGG CCGCGCCTCC TGCCCAAGCG CAACGGCGGA
CTTGTGGCGT GCCACCTGCT GGACTAG
 
Protein sequence
MEALLDVQNL TVKFALRDEA LTAVNDVSFT LGRGERLGLV GESGAGKSVT GFSIINLISK 
PGFIAGGSVL FEGNDLVTTD AETLRDIRGN RISMIFQDPM MTLNPVLTIG SQMVETILAH
QKMSRREAEE IALDKLRKVY IPSPEKRLKQ YPHEFSGGMR QRIVIAIALL TSPSLIIADE
PTTALDVTIQ AEIMDLLLEL CESEKMGLIL ITHDLGVVSQ VTQKIAVMYA GRIVEMGETA
RIVADPQHPY TKGLLAALPQ GNSCGGGCVG KRHRLNQIPG AMPSLSEIAH GICPFHNRCE
LCQDVCRTSR PRLLPKRNGG LVACHLLD