Gene Dvul_2800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2800 
Symbol 
ID4663910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp3256837 
End bp3257814 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content61% 
IMG OID639821055 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_968238 
Protein GI120603838 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.683893 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGCAT TCATCATACG CAGGGTTGCC CAGGCGCTCC TTGTCATGTT CATCATCAGC 
CTGCTCGGGT TCGCCATCAA GTATTCGTTC GGCGACCCCA CGCGTGAGAT GATGGGCGTT
TCGGTATCTG TGAAGGAGCG CGAGGCCCTG CGCGAAGAGC TTGGCCTCAA CGACCCGTTC
GCCGTCCAGT GGACCCGCTT CGCCTCGGGC GCCCTCAAGG GCGACCTCGG CATCTCGTAT
TTCTACCGCA AGCCCGCCCT CGACGTCATA CTCGACAAGG CACCTGCCAC CCTCGAACTG
GTGTTCGTGG CGGCATGCCT CATCATCCTC ATCTCCGTAC CCGTGGGCGT CTATGCGGCG
TGCCGCCCCA AGGACGTGCT TTCACGTCTG TTCATGGGCG TAAGCACCAT CGGTGTGTCG
GTGCCGGTCT TCCTCACCGC CATATTCCTC ATCTACATCT TCTCGGTGAA CCTCGGCTGG
CTGCCCTCTT TCGGGCGCGG CAACCCTGAG CACGTCATCG GCTCATGGGA CACGAACCTC
ACCACGTGGG CCAACTTCAA GCACATCATC CTGCCCGGCA TCTCGCTCTC CTCCATCATG
CTGCCGCTCT TCATCCGCCT CATCCGCGCC GAGATGAAGG AAGTGCTCGA GACCGAGTAC
GTCAAATTCG CCCGCGCCAA GGGCCTTAAG ACATGGCGCG TCATCATGGT TCATGCCTTC
AAGAACACGC TGCTGCCGGT CATCACCGTC GGCGGGGTGC AGCTTGGCAC CATGATCGCC
TTCACCATCC TCACCGAGAC GGTCTTCCAG TGGCAGGGCA TGGGCTTCAT GTTCATCGAC
GCCGTGGAAC GCGCCGACAC CTCGCTGCTT GTGGCGTACC TCATCTTCTG CGGCGCCATC
TTCGTGACGG TGAACACCGT GGTCGACATC GTCTACGGTC TGGTGAACCC CATGGTCCGC
ATCGCGGGGA GGAAATAG
 
Protein sequence
MFAFIIRRVA QALLVMFIIS LLGFAIKYSF GDPTREMMGV SVSVKEREAL REELGLNDPF 
AVQWTRFASG ALKGDLGISY FYRKPALDVI LDKAPATLEL VFVAACLIIL ISVPVGVYAA
CRPKDVLSRL FMGVSTIGVS VPVFLTAIFL IYIFSVNLGW LPSFGRGNPE HVIGSWDTNL
TTWANFKHII LPGISLSSIM LPLFIRLIRA EMKEVLETEY VKFARAKGLK TWRVIMVHAF
KNTLLPVITV GGVQLGTMIA FTILTETVFQ WQGMGFMFID AVERADTSLL VAYLIFCGAI
FVTVNTVVDI VYGLVNPMVR IAGRK