| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2664 |
|---|
| Symbol | |
|---|
| ID | 4663115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 3106573 |
|---|
| End bp | 3107136 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639820911 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_968103 |
|---|
| Protein GI | 120603703 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3063] Tfp pilus assembly protein PilF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCC ATCTGGATTA CGAAATCAAC AAGGAATTGG GCGAGTGCTA CCTGTTCATG
GGTGACCTCG AAAAGGCGGA GGACTACTAC CGCAAGGCTG CCGCCAGCAA TGGCGTGCAT
CCCGACCCAT ATCTCGGACT CGCAACCATC GCCGTCCAGC GCGGTGCGCT TTCGGACGCA
CTCGTCCTCT ACCGCAAGGC GGCGGACATC GAAGCGGGAG ACAAGGCCCT TGCGGGCATG
GGTCTCGTGG AGATGGAACA GGGCGACGCC GAGGCGGCCT ACGGGCACCT CGCCGCAGCG
CTGGCGCTGA ATCCCGAGAA CCTTGTCGCC ATGAATTGCA TCGTGCGTCT CGGATACCAT
TTCGGGCGTG TCGCCGATGT CGTGCCGTAC CTCGAGAATT ATCTCTCTCT TGTCCCGGGA
AAGGACACCG TGCGTACCAC GCTTGCGGGC TGTCTCATCA CCCTCGGACG CCCTGAAGAG
GCACGTGCCC ATCTTGAACA GGTATTGGCC GGCGACCCCG CCAACCCCGA GGCACGTTCA
CTGTATGAAG GTCTCGCCGC CTAG
|
|---|
| Protein sequence | MSSHLDYEIN KELGECYLFM GDLEKAEDYY RKAAASNGVH PDPYLGLATI AVQRGALSDA
LVLYRKAADI EAGDKALAGM GLVEMEQGDA EAAYGHLAAA LALNPENLVA MNCIVRLGYH
FGRVADVVPY LENYLSLVPG KDTVRTTLAG CLITLGRPEE ARAHLEQVLA GDPANPEARS
LYEGLAA
|
|---|
| |