Gene Dvul_2642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2642 
Symbol 
ID4663394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp3081170 
End bp3081940 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content61% 
IMG OID639820889 
Product3-deoxy-manno-octulosonate cytidylyltransferase 
Protein accessionYP_968081 
Protein GI120603681 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase 
TIGRFAM ID[TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCA TCGCCATCAT CCCCGCCCGC ATGGGCTCCA GCCGTTTTCC GGGCAAGCCC 
ATGGCCGACA TCCACGGTGT GCCCATGGTG GGCCATGTGA CCTTCCGCAC CGCCATGAGC
AAGTGCCTCA CCGAGACCTA TGTCGCCACC TGCGACAAGG AGATATACGA CTACGCCGAA
AGCGTGGGCC TCAAGGCCGT CATGACCGGC GACCACCATG TGCGCTGCAC CACCAGAACC
GCAGAGGCCA TGCTCAAGAT CGAAGAGGCC ACTGGCCGCA AGGCCGACAT CGTGGTCATG
GTGCAGGGTG ACGAACCCAT GGTCACCCCC GACATGATCG ACGCCGCCAT CGAACCCATG
CTGAAAGACC CGTCCATCAA CGTGGTCAAC CTCATGGCCG AGATGGAGAC CGTGGCCGAG
TTCGAAGACC CCAACGAGGT CAAGGTCGTG GTGGACTTCA ACAACGACGC GCTCTACTTC
TCGCGCGAGC CTGTGCCTTC GCGCAAGAAG GGCGTCACCG AAGTGCCCAT GCGCAAGCAG
GTGTGCATCA TCCCCTTCCG TCGCGACTAT CTGCTCAAGT TCAACGAGAT GCAGGAAAGC
CCGCTCGAGA TCATCGAGTC GGTGGACATG ATGCGCATCC TCGAACACGG CGAGAAGGTG
CGCATGGTGC CCACCGACAA GCGCACCCTA AGCGTCGACA CGGCTGAAGA CCTCGCACGT
GTCATCGAAA TGATGCGCGA AGACACCCTG CGCGCCGTCT ACACGAAGTA G
 
Protein sequence
MNIIAIIPAR MGSSRFPGKP MADIHGVPMV GHVTFRTAMS KCLTETYVAT CDKEIYDYAE 
SVGLKAVMTG DHHVRCTTRT AEAMLKIEEA TGRKADIVVM VQGDEPMVTP DMIDAAIEPM
LKDPSINVVN LMAEMETVAE FEDPNEVKVV VDFNNDALYF SREPVPSRKK GVTEVPMRKQ
VCIIPFRRDY LLKFNEMQES PLEIIESVDM MRILEHGEKV RMVPTDKRTL SVDTAEDLAR
VIEMMREDTL RAVYTK