Gene Dvul_2640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2640 
Symbol 
ID4663314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp3079168 
End bp3079950 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content68% 
IMG OID639820887 
Product2-dehydro-3-deoxyglucarate aldolase 
Protein accessionYP_968079 
Protein GI120603679 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.989277 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACCG CACACGATAT CCGCTCCAAG ATGCAACGGG GCGAAGCCAC CATCGGCACA 
TGGATGCAAC TGCCCTCCAC CGACGTGGCC GAGATACTGG GCCGCGCCGG GTACGACTGG
GTGGCGGTCG ACCTCGAGCA CGCCGCCTTC ACCCGCGCCA TGCTGCCCGA CCTGTTCCGC
GCCATCGAAC TCGGCGGCAC GGCACCGTTC GCCCGCGTGG CCGAGGCGAC CCTGACCGAC
ATCAAGGCCG CGCTCGATTC GGGCGCACAC GGCATCATCT TTCCCATGAT CGAAACACGC
GAACAACTCG ACGCCGCCAT CGGCTGGGCG TTGTACCCGC GCACCGACGG GCCTTCGGGC
ATCCGCGGCG TGGGCTACTG CCGGGGCAAC CTCTTCGGCC GCGAGTTCGA CGCCTACCGC
AACACCACCG CGCGCGACCT CGTGTTCGTG GCCCAGATAG AGCACATCCG CGCCGTGGAG
AACCTCGACG CCATCCTCGC GCACCCGCGC CTCGACGCCA TCATGGTCGG CCCCTACGAC
CTTTCCGGTT CCATGGGGCT GACGGCACAG TTCGACCACC CCGATTTCAA GGCCGCGCTC
GACCGCATCC GTGACAAGGC CGTGGCACAC GGCGTGCCCA TGGGCCTGCA CATCGTCCAG
CCGGACGAGG CGCTGGTACG CGCCAAGGTG GCCGAAGGCT ACCGCTTCAT CGCCTACGGC
ATCGACGCCG TGTTCCTCTA CCACGGGGCA CAGTGCCCCG CCCCTACAGC AGAACGGAAG
TGA
 
Protein sequence
MTTAHDIRSK MQRGEATIGT WMQLPSTDVA EILGRAGYDW VAVDLEHAAF TRAMLPDLFR 
AIELGGTAPF ARVAEATLTD IKAALDSGAH GIIFPMIETR EQLDAAIGWA LYPRTDGPSG
IRGVGYCRGN LFGREFDAYR NTTARDLVFV AQIEHIRAVE NLDAILAHPR LDAIMVGPYD
LSGSMGLTAQ FDHPDFKAAL DRIRDKAVAH GVPMGLHIVQ PDEALVRAKV AEGYRFIAYG
IDAVFLYHGA QCPAPTAERK