Gene Dvul_2582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2582 
Symbol 
ID4664305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp3012939 
End bp3013604 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content53% 
IMG OID639820830 
ProductABC transporter related 
Protein accessionYP_968024 
Protein GI120603624 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000122652 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGATCGAGT TACGTAACAT CAACAAAAGC TATCCCCTGT CCCGATGCGG ACGGAGGGAG 
ATTCTGCACA ACGCCAGCAT CACTTTCCGG CCAGGTGTGA ACATGGGGAT TCTTGGTCTA
AACGGTCAAG GCAAGTCCAC GCTCATACGC ATCATTAGTG GAGCAGAGTC CCCAGACAGC
GGGACTGTGA CACGAAAGGG ACGAGTGTCC TGGCCCATCG GTTTTACCGG AGGTTTCAAC
GGCAGCCTGA CCGGTCGGGA AAATCTGCGC TTCACCTGCC GCATCTACGG CGCGGACATT
CGGGGAGTAA CAAATTTTGT AGAGGCATTC TCAGAACTTG GCCCATACAT GGACATGCCC
GTGAAAACCT ATTCGTCGGG CATGCGCTCA AAACTGGCTT TCGGGCTGAG TATGGCCATC
GGTTTTGATT TCTACCTCAT TGATGAAGCG TACTCTGTAG GCGACGCATC CTTTCAGGCC
AAAGCTGAAA AAGTTTTCAA GGAGCGCAAA GCGCAAGCCA CGTTGATCGT GGTGTCGCAC
AGCGTGGCCA CCATCCGCAA AAACTGCGAC AGAGCCGCCG TACTGCACAA CGGTGTACTG
TCCGAATACG AAACTCTGGA CGACGCCTTA CGTGTTTATG CGGAGACTTG CAATGTCGGA
CATTAA
 
Protein sequence
MIELRNINKS YPLSRCGRRE ILHNASITFR PGVNMGILGL NGQGKSTLIR IISGAESPDS 
GTVTRKGRVS WPIGFTGGFN GSLTGRENLR FTCRIYGADI RGVTNFVEAF SELGPYMDMP
VKTYSSGMRS KLAFGLSMAI GFDFYLIDEA YSVGDASFQA KAEKVFKERK AQATLIVVSH
SVATIRKNCD RAAVLHNGVL SEYETLDDAL RVYAETCNVG H