Gene Dvul_2581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2581 
Symbol 
ID4664283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp3012106 
End bp3012942 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content54% 
IMG OID639820829 
ProductABC-2 type transporter 
Protein accessionYP_968023 
Protein GI120603623 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.817053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000138463 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCGTTTC ATCCCTACCA TCTTCGAGAG CATGCCACGA TGACCGCCGA CACCTTACCT 
TCTCCATCTG TTTCTTCCCC ACTGAAAGTG CAATGCCGAG TAATTGCCGC CCTTATCCTG
CGGGAAGTTC ATACTCTGTA CGGTAATACC AAGCTTGGAT ATCTCTGGGC GGTTATTCAA
ACGGCTTTCG GCATTGGCGT TTTCTGGGCT TTCCGTGAAC TAATGGGAGC GCATGCTCCA
CACGGTACAG GGATGGCCGT ATTTCTGCTC TGCGGCTTTA TCCCCTGGTA TATCTTCAGC
GATACGGTCA ACCGCTGCAT GAAGGCCGCA AGCGCAAACC AAGCCTTGCT GACCTTCCCG
CAGGTGACGG AGTTGGACCT GATGCTCGGA AGACTCGTTG TGGTCTGGGG AACACAAGTT
CTATCCGCCG GGATTATCCT GTCCGTTGCC GCCGCTTGTG GGCAGGCAGT GGAATTGCGC
GATCCTGCTT CTCTTACCGC CACGTTGTTT TTTGCGCCTC TGTTGGGCTT GGGACTAGGA
CTGATTTTCG CGTCTCTGGC CCGTTTCTGG CCCACACTGG ACAAACTGAT CCCCATGTGT
CTGCGGATTC TGTTCCTTGC TTCCGGCGTC TTTTTTTATG TTTCTGAACT GCCTGGCAGA
TTAGCGAATA TTCTCCTGCT CAATCCCGTT GCTCAACTTA TTGAGTGGCA ACGCTACGGC
TTTTCCGCAT CCTCCGCAGC CCCAGCCTAC AACATCGTCT ATATCTCCGC ATGGTGCGCC
ACTTCCTTGT CCATAGGTCT GCTACTTGAA CGGTATGCCC GTAGGAGGGG CCTGTGA
 
Protein sequence
MAFHPYHLRE HATMTADTLP SPSVSSPLKV QCRVIAALIL REVHTLYGNT KLGYLWAVIQ 
TAFGIGVFWA FRELMGAHAP HGTGMAVFLL CGFIPWYIFS DTVNRCMKAA SANQALLTFP
QVTELDLMLG RLVVVWGTQV LSAGIILSVA AACGQAVELR DPASLTATLF FAPLLGLGLG
LIFASLARFW PTLDKLIPMC LRILFLASGV FFYVSELPGR LANILLLNPV AQLIEWQRYG
FSASSAAPAY NIVYISAWCA TSLSIGLLLE RYARRRGL