Gene Dvul_2573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2573 
Symbol 
ID4664381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp3004804 
End bp3005646 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content56% 
IMG OID639820822 
Productextracellular solute-binding protein 
Protein accessionYP_968016 
Protein GI120603616 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000612077 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000188073 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTGATA ATTTTTGCCA GGCACCCCAC ATACGGGGCC TGCTGGTCAC TGCCCTGCTC 
CTGGCCTTCT CTGTTAGTCC TGTGTTGGCA CAGGACACGG ATAACCCCCA GAAGGAGCCG
TTGCGTCTCG CCTTCTTCAA CGATTATGCC CCCTATTCGT GGGAGGAGGG GGGGCGCATG
CGCGGAATCC TCGTTGACGT GATGGACGAA ATCTTGAGCC GACGCATGGG GCTGGCGGTG
GAATACATGG GATACCCTTG GGCCCGCGCC CAGGAACATG TGAAGAGCAG GAAAGCCGAT
GGATTCGTCA CGCTGCCAAA CGATGAGCGG CGATCTTACG TGATATTTTG TGAGTTACCG
GTGCTAATCG GGACTTACAC TGTTTTCGTG AACAGAAAAA ACGCCCACAA CCCAGACATG
GCCGACATCT CCTCAATCCC GGATTTAAAA CGATTCGTTG TCGGCGGATA TCTCGGGAGC
AGTTGGGCTT CTAGACATCT TGAAGCGCAA GGAGTGCCCA TTGTTTGGAC CAACAATTTG
GAATCGCTGC TCCGAATGCT TGTGGCGGAC CGTATCGAGA TGGTTTCGAA CAACTCCGCC
GTCATTAAAT ACAACCTTCG TCTGCTCGGA CTTTCCGACA AAGTCGCCGA GCTTCCGAAC
GTCCTCGATC AGGCCCCCTT CAATCTGGGT ATCGGAAAAC AGTCCCCATA CCTGTCCGTT
CTCCCCGAAT TCGAGGAAAC GCTGCGCAAA CTGACCGACG ATGGGACGAT CAAGGCAATC
GTTGAGCGAT ACACGGTGAG CGCACCGCCC CCCGGCCCTG CCGCACACGA CAGTGTCAGG
TGA
 
Protein sequence
MRDNFCQAPH IRGLLVTALL LAFSVSPVLA QDTDNPQKEP LRLAFFNDYA PYSWEEGGRM 
RGILVDVMDE ILSRRMGLAV EYMGYPWARA QEHVKSRKAD GFVTLPNDER RSYVIFCELP
VLIGTYTVFV NRKNAHNPDM ADISSIPDLK RFVVGGYLGS SWASRHLEAQ GVPIVWTNNL
ESLLRMLVAD RIEMVSNNSA VIKYNLRLLG LSDKVAELPN VLDQAPFNLG IGKQSPYLSV
LPEFEETLRK LTDDGTIKAI VERYTVSAPP PGPAAHDSVR