Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_2571 |
Symbol | |
ID | 4664412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 3001226 |
End bp | 3002035 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639820820 |
Product | extracellular solute-binding protein |
Protein accession | YP_968014 |
Protein GI | 120603614 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0744474 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0010566 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCACCTG CTGCGCATGG CACAAAGCTC ACCTCAACCA TTTTTTTCAT ATGCACCATC ACCCTACTTT CCCTCCTAAT TTCCTCCGTG GGAAAAACGG AAAGCTATCA TCCCCCTCAA GGAACACTCG TGGTGACAGG GGATCCATGG CCACCGTTTG CCGACCCAAA CGATCCTAAC CTTGGCATCG CTCCTTGTAT TCTATCTAAA ACACTCACCA ACCCAGAATC AAAAGTAAAA ATGCTATTTC AGCCATGGGC TAGAGCGGAA ATAGCAGTGG ACGAAGGACG GGCGGACGTA CTTATAAACT GTGCAAAAAC TGACCGCAGA GAAGAGACTT ATTACTTCAG CAATCCTTAT ATCAAAATTA AACTTGTCTT GATAAAGCGA TCTGATGATC CTTTTGTTTA CACAGGCCTA AATAGCTTAT CTGGCAAAAG AATTGGAACC GTATACGGAT ATGCATACCC TGACTATTTC ATAAACAATG AAAAAATCTA TAAAGATCCG GTCAAAACAA TTTCTGACAA CTTTAAAAAA CTTCATGCAA ACAGAATTGA TCTAATAATT GATGACGAAC TTGTAGCCAC CAAACAACTT CTAAATATGC CAACACCATA TTCTAATAAT TTTGAAATCA TTCCAACAGA AATCGCCCCC ATAGATCTTC ACATTGCAAC ATCAAGAAAA AACCCTTCAG GATCAAAAGT AATAGACTTA TTCAACGCCA ACCTTAAGAA GATCATGGAC AATGGAGTGT ACCAAGACAT CATGTCGGCC TATCAAGCCA ATAAAAGCTC TATCAAATAA
|
Protein sequence | MSPAAHGTKL TSTIFFICTI TLLSLLISSV GKTESYHPPQ GTLVVTGDPW PPFADPNDPN LGIAPCILSK TLTNPESKVK MLFQPWARAE IAVDEGRADV LINCAKTDRR EETYYFSNPY IKIKLVLIKR SDDPFVYTGL NSLSGKRIGT VYGYAYPDYF INNEKIYKDP VKTISDNFKK LHANRIDLII DDELVATKQL LNMPTPYSNN FEIIPTEIAP IDLHIATSRK NPSGSKVIDL FNANLKKIMD NGVYQDIMSA YQANKSSIK
|
| |