| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2569 |
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| Symbol | |
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| ID | 4664455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 2999489 |
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| End bp | 3000421 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639820818 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_968012 |
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| Protein GI | 120603612 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.809417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000987173 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGCGA CAACAAATAT AGACACATTA GATCACAAAA TTTTAAAAAA ACTCGCAGAG
ATCATAGACT GCGTTAACGA TAGTGTTTAC ATCGTTGATG AAAACCGCAG AATAAAATTA
TGGAATAAAT CGGCAGAATT ACTAACTGGA TTTTCAAAAA AACAAACTAT CAATAAAAAA
TGTTGTGAGC ATTTACTCAA TCATGTTGAT GCAAACGGAA AAGAATTATG CAGAGACGGA
TGTCCAATAT TGAAATCAAT CAACAGCGGA GAGCCAACAA GGAGCAACCT TTTCTTACAT
CATAAGGATG GGCATAGAGT TCATGTTGAT GTCGAAATTT TCCCTTTAAT AGATAGTAAC
GGAAAAATAA ATGGCGCAAT TGAAGTTTTT AGAAAAGCTA CGAATCACTG TACAATAGAC
AACAAAACAG ACAACACACT AATCCGCGAC GAGTTGACAG GTACATGGAC CAAGAAAAGG
TTAATAAAGT CTCTTACAAG CAGAATAGAT CAACTCAGAA TATTTGGATG GAATTTTGCG
ATCCTCTTCA TAGATGTCGA CAAGTTCAAG TCTATTAACG ATACACACGG ACACGTCACT
GGAGATAAAA TTCTAGTCAT GATTGCTAAA ACATTGATGT CAAATCTACG CGCAGGCGAT
GAAATATACA GATACGGAGG AGAAGAATTT GTCATTGTAC TACCAGACAT CAAAGACCAA
GAACATCTAT TTCAGATATC GGAAAAATTA CGAAAACTAG TAGAGTCATG CTTTTTGGAA
ACCAACGGCA CACTTTTAAA TGCAACAATA TCACTCGGAG GCATCATTGC CACAGGAAAC
GACTCAGCTG AATCGTTAAT ATCAAAAGCA GACAAGCTAA TGTATGCCGC CAAAAAGAGC
GGAAGAAACA AATCAATGAT AGACAATTAT TGA
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| Protein sequence | MKATTNIDTL DHKILKKLAE IIDCVNDSVY IVDENRRIKL WNKSAELLTG FSKKQTINKK
CCEHLLNHVD ANGKELCRDG CPILKSINSG EPTRSNLFLH HKDGHRVHVD VEIFPLIDSN
GKINGAIEVF RKATNHCTID NKTDNTLIRD ELTGTWTKKR LIKSLTSRID QLRIFGWNFA
ILFIDVDKFK SINDTHGHVT GDKILVMIAK TLMSNLRAGD EIYRYGGEEF VIVLPDIKDQ
EHLFQISEKL RKLVESCFLE TNGTLLNATI SLGGIIATGN DSAESLISKA DKLMYAAKKS
GRNKSMIDNY
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