| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2560 |
|---|
| Symbol | |
|---|
| ID | 4662111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | + |
|---|
| Start bp | 2988235 |
|---|
| End bp | 2990646 |
|---|
| Gene Length | 2412 bp |
|---|
| Protein Length | 803 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639820809 |
|---|
| Product | CoA-binding domain-containing protein |
|---|
| Protein accession | YP_968003 |
|---|
| Protein GI | 120603603 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1042] Acyl-CoA synthetase (NDP forming) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00545534 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAAC AGAACGGCGC CTTCATCGAC CACGACGCCA TCACGTCGCT TTTCAGGAGC
GCGCGAGACG AGGGACGCGA CTACCTGCTT GAATACGAAG TGTACAATCT GCTTGGAAGC
TCCGGTGCGG AGACCCCGCC CAAGTGCATC CTCATCCCCC GCGGTGCCCG CCCCTCCGAT
GACGAACTCA TGGCCCTGCC CGGCGAGAAG GTGGTGCTGA AGATCGTTTC GCCCACCATC
ATCCACAAGA CCGAAGTGGG CGGAGTGCGC ATCGTTCCCA AGAGCCCCGA GAAGATCCGC
TCCGCCGTGC GCCGGATGCT CTGCGAAGTG CCCGAGAACT ATGCCAACAT GATCAACCTC
GACCCCGCCC ACGCGCCGTC CGCCTACCGC GGGCTGTCCG GCGAGGCGCT GGTCACGGCG
ATACGGGGCG ACCTCAAGGG CGTGCTCATG GTGCAGTTCA TGCCCCCCGA CTCTTCGTCC
TTCGGCAACG AACTCATCGT GGGCCTGCGC AACACCCGCG AATTCGGCAT GGTCGTCAGC
GCCGGTCTCG GCGGCACCGA CACGGAGTTG TACGCCGAAC GCTTCCGCAA GGGGCAGGCC
ATCGTGGCGG CCTCGTGCGA ACTGACCGAC GGCGAGACCT TCTTCGAACT CTTCCGCAAG
ACCATCTCCT ACAAGAAGCT CGCCGGTCTC ACCCGCGGTC AGCGTCGTGT CGTGACGGAC
GAACAGCTCG TCGAATGCTT CAGTTCGTTC ATCGAGATGG GCCGCCGCTA CTCGCCCACG
AACCCCGACA CCGAGTTCGT GATCGAAGAG ATGGAGATCA ACCCCTACGC CTTCACCGAT
TTTCTCATGG TGCCGCTCGA CGGCATGTGC CGTTTCGGCA GACCCACCCC GCGCGAAAGC
GGGCGGCCCA TCGCCAAGAT CGACCGCCTG CTGCACCCCC GCAAGATAGG CATCGTCGGT
GTCTCCACGA CGCGCAAGAA CTTCGGCCGC ATCATCCTCG ACAACGTCCT TTCCGCGGGC
TATGCGAAAG AGGATGTGTA CCTTCTGCGC GAGGGCGCTG ACGAGATCGA CGGGGTGAAG
TGCTTTCCCG ATCTCGCGTC TCTGCCCGAG AAGCTCGACC TGTTCGTCGT GGCTGTCGGC
GCGGCACAGG TTCCCGACCT CGTTGACGAG GTCATCCGTC TCGACGCTGC CAACACCGTC
ATGCTCATCC CCGGTGGCAT GGGCGAGACC GAAGAGAGCC GCGAACGTGC CGCCAAGGTC
ATCGCCGCCA TCAACGAAGC ACACGGCAAG GGCGACGGGG GCCCCGTGTT CCTCGGCGCC
AACTGCATGG GTGTGGTCTC GCACCCCGGC AGGTACGACA CGTGGTTCAT CCCTGAAGAG
AAGCTGCCCA AGAACCGCGA GGCCAGCTAC CACCGTGCCG CGCTGGTGAG CCAGTCGGGT
GCGTTCATGC TTCACCGTTC GAGTCAATGC CCTGAACTCA ACCCCGCCTA CATGGTCTCC
ATGGGCAACC AGACAGACCT GACCCTCGGC GACATGGTGA AGTACTTCAA AGACTCCGAT
CAGGTGGATG TCATCGCCGT ATATGCCGAA GGGTTCAACG ACCTCGACGG GCTCGAGTTC
TGCACTGCCG TGCGTGAAGC CGTCCTCGCA GGCAAGGAGG TACTCTTCTA CAAGGCAGGA
CGCACCCCCG AGGGCAAGAA CGCCACGAGC GGCCACACGG CCTCACTCGC GGGCGACTAC
ATGGTCTGCG AATCGTGCGT GCGTCAGGCC GGGGCCATGG TCGCCCGCAA CTTCACGGAG
TTTCAGGACC TTTTCATGCT GGCAGAGACT CTCGCCTCCA AGAGGATACG CGGCAACCGC
CTCGCCGCAG TCAGCGGTGC AGGTTTCGAG GCCGTCGGCA TGGCGGACTC CATCCAGTCT
GACGACTACC AGATTCGCCT TGCCTCGTTC TCTGAAGCAA CGCACGAAAG GATCACCGCA
GTGTTACAGG CCAAGAAGCT GGCGGGTCTT GTCAGCGTGC ACAACCCGCT GGACATCAAC
CCCTCGGCCG ATGACGAGGC CCACGCCACG GTAGCGGGGA TTCTCGCCAG CGATGACGGA
GTGGACGCCG TCGTCATAGG CCTCGACCCC CTTTCGCCCG CCATGCACAC CCTGTCCGGG
ACGGACGTGC CCGCGTTCGA CATGACAGCG GCGAATGGCA TCGCCTCCCT TCTCGGCAGT
GTTGCCGCAG GCTGCGACAA GCCCATCCTT GGCGTCATCG ACGGTGGCAA GCTGTACGAC
CCCCTGCGTG ACGTCCTCAA CGCCTGCGGC ATTCCGGTAT TCCCGGTATG CGACCGGGCC
GTTGCGACCC TCGCGCAGTA TATCGAGGCA CGACTCCACG CCGACGCCCT CCGCGCCGAG
GCAGCCATCT AG
|
|---|
| Protein sequence | MEEQNGAFID HDAITSLFRS ARDEGRDYLL EYEVYNLLGS SGAETPPKCI LIPRGARPSD
DELMALPGEK VVLKIVSPTI IHKTEVGGVR IVPKSPEKIR SAVRRMLCEV PENYANMINL
DPAHAPSAYR GLSGEALVTA IRGDLKGVLM VQFMPPDSSS FGNELIVGLR NTREFGMVVS
AGLGGTDTEL YAERFRKGQA IVAASCELTD GETFFELFRK TISYKKLAGL TRGQRRVVTD
EQLVECFSSF IEMGRRYSPT NPDTEFVIEE MEINPYAFTD FLMVPLDGMC RFGRPTPRES
GRPIAKIDRL LHPRKIGIVG VSTTRKNFGR IILDNVLSAG YAKEDVYLLR EGADEIDGVK
CFPDLASLPE KLDLFVVAVG AAQVPDLVDE VIRLDAANTV MLIPGGMGET EESRERAAKV
IAAINEAHGK GDGGPVFLGA NCMGVVSHPG RYDTWFIPEE KLPKNREASY HRAALVSQSG
AFMLHRSSQC PELNPAYMVS MGNQTDLTLG DMVKYFKDSD QVDVIAVYAE GFNDLDGLEF
CTAVREAVLA GKEVLFYKAG RTPEGKNATS GHTASLAGDY MVCESCVRQA GAMVARNFTE
FQDLFMLAET LASKRIRGNR LAAVSGAGFE AVGMADSIQS DDYQIRLASF SEATHERITA
VLQAKKLAGL VSVHNPLDIN PSADDEAHAT VAGILASDDG VDAVVIGLDP LSPAMHTLSG
TDVPAFDMTA ANGIASLLGS VAAGCDKPIL GVIDGGKLYD PLRDVLNACG IPVFPVCDRA
VATLAQYIEA RLHADALRAE AAI
|
|---|
| |