| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2517 |
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| Symbol | |
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| ID | 4663660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 2940913 |
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| End bp | 2942832 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639820766 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_967960 |
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| Protein GI | 120603560 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.332138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.039824 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCAAGAA ACCGTACGTT GCAGCAGTGG GGTGTCGAAG ACTCCGCTGA ACTCTATGGT
ATCCGCAACT GGGGTGCGGG ATACTTCGAT GTCGCACAGA ACGGCGATGT CGTCGTATAC
CCCTTCGGTC ATAACCGCGG TCCTGCCGTA AGCATTCCCG AGATCATCGG GGGCATGCGG
GAGCGCGGCT ACGACATGCC GGTGCTCCTG CGCATCGAGA ACATCCTCGA TTCCCAGATC
ACCAGTCTTC ACACATCCTT TCGCAACGCC ATCGGCTCGC TCGGCTACAA GGGCGAATAC
CGGGGCATCT TTCCCATCAA GGTCAATCAG CAGCAGCAGG TGGTCGAGAA GATCGCCCAG
TTCGGTTCGC ACTACCACCA TGGTCTCGAG GTGGGCAGCA AGGCCGAGCT CATCGCCGCC
GTCTCGCAAC TGCGCGACCG CGAGGCGTGC CTCGTGTGCA ACGGCTACAA GGACGAAGAG
TTCATCGACC TCGGCCTGCA TGCGGTGCGT CTCGGCTTCA TGTGCATCTT CGTGCTGGAG
ATGCCGGGCG AACTCGACCT CATCCTCGAA AGGGGCGAGG CGCTCGGCGT GAAGCCCATC
ATCGGCGTCC GGGCCAAGCT TTCCGTCAAG GCGGGCGGGC ACTGGACCGA TTCGGGCGGC
GAGCGTTCGA CCTTCGGCCT CACCACGTCG CAGATTGTGG ACGTGGTGGA CAGGCTCAAG
GAAAAGGGCA TGCTCGACTG CTTCAAGCTG CTGCACTACC ATCTCGGGTC GCAGGTGCCC
AACATCCGCG ACATCCGCGC CGCCGTCATG GAGGCTTGCC GCATCTATGC GGGCCTCGTG
CAGGAAGGGG CGGCCATGGG CTTCCTCGAC CTCGGCGGCG GTCTCGCCGT CGACTACGAC
GGTTCGCACA CCAACTTCGT CAGCAGCCGT AACTACACGC TCGACGAATA CTGCGCCGAC
ATCGTCGAGG CGGTCATGAC CACCCTCGAC GAGCAGAACA TCCCCCATCC CCATATCGTC
ACCGAGTCGG GGCGGGCCAC CGTGGCCTAC TATTCCATGC TGCTCTTCAA CATCCTCGAT
GTGAGCCGCG TGGAGATAGG CAACCTGCCC GACGCCCTGC CCGAAGACAC GCCCGAACCC
GTGCGCAACA TGCGCGAGGT GCTTGCGGGC ATGACCCTGC GCAACCTGCA GGAGTGCTAC
AACGACGCGC TCTACTACCG CGACGCCGTG CGGCAGCTCT TCCTGACAGG GCAGGTGACC
CTGCGGCAGC GTACGCTCTC CGAGCGGCTG TTCTGGGCCA TCATGAAACG CATCGCGCAG
GAGAAGCAGA AGCTCAAGCA CGTGCCCAAG GACCTTGCCG AGATCGACGT GGCCCTCGCC
GACATCTACT ACGGCAACTT CAGCGTGTTC CAGTCGCTGC CCGACTCGTG GGCCATCGAC
CAGCTTTTCC CCGTCATGCC CGTGCACAGG TTGCAGGAAC TGCCGTCACG GCAGGGCATC
CTTTCGGACA TCACCTGCGA CAGCGATGGC CGTATCGACC ACTTCATCGA CCCGCAGGGC
ATGAAGGGAA CCCTCGACCT GCATCCCCTG CGTGATGGCG AGGAATACTA CCTCGGCGTC
TTTCTCGTGG GGGCCTATCA GGAGACGCTG GGCGACCTGC ACAACCTGCT TGGCGACACC
AACGTGGTCA GCGTGCGCGT GCATGAGGAC GGCACCTACG AGTTCGTCCG CGAGATACGC
GGCGACTCCG TGGCCGACAT CCTCTCCTAC GTGGAGTATG ATCCTCGCAG GATATACGAG
GACATCCGCG AACTGGCCGA ACGTGCGGTG CGCGAAGGGC GCATCACCGC CTCCGACCGT
TTCCGGGTGA TGCAGGCCTA CGAAGACGGA CTCCGCGGCT ACACCTACTT CGAACGGTAA
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| Protein sequence | MARNRTLQQW GVEDSAELYG IRNWGAGYFD VAQNGDVVVY PFGHNRGPAV SIPEIIGGMR
ERGYDMPVLL RIENILDSQI TSLHTSFRNA IGSLGYKGEY RGIFPIKVNQ QQQVVEKIAQ
FGSHYHHGLE VGSKAELIAA VSQLRDREAC LVCNGYKDEE FIDLGLHAVR LGFMCIFVLE
MPGELDLILE RGEALGVKPI IGVRAKLSVK AGGHWTDSGG ERSTFGLTTS QIVDVVDRLK
EKGMLDCFKL LHYHLGSQVP NIRDIRAAVM EACRIYAGLV QEGAAMGFLD LGGGLAVDYD
GSHTNFVSSR NYTLDEYCAD IVEAVMTTLD EQNIPHPHIV TESGRATVAY YSMLLFNILD
VSRVEIGNLP DALPEDTPEP VRNMREVLAG MTLRNLQECY NDALYYRDAV RQLFLTGQVT
LRQRTLSERL FWAIMKRIAQ EKQKLKHVPK DLAEIDVALA DIYYGNFSVF QSLPDSWAID
QLFPVMPVHR LQELPSRQGI LSDITCDSDG RIDHFIDPQG MKGTLDLHPL RDGEEYYLGV
FLVGAYQETL GDLHNLLGDT NVVSVRVHED GTYEFVREIR GDSVADILSY VEYDPRRIYE
DIRELAERAV REGRITASDR FRVMQAYEDG LRGYTYFER
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