Gene Dvul_2475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2475 
Symbol 
ID4662428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2881076 
End bp2882251 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content67% 
IMG OID639820723 
Productchorismate mutase 
Protein accessionYP_967918 
Protein GI120603518 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0077] Prephenate dehydratase
[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01807] chorismate mutase domain of proteobacterial P-protein, clade 2 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.248764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCAC CCGAACCCGT GAACGGCACA CCGCCTGATG TGGCGCAACG GCTACAGGCC 
ATCCGCGTGA CCATCGACGG TCTCGACCGC GACCTGCTTG CGCTGCTCAA CCGACGCGCC
GCACTGAGTC TTGAGGTCGG CCGCATCAAG GCCACCGACC CCGGCATCGT CTTCCGCCCC
TTCCGTGAGC GCGAGGTGTT CGACAACCTC GAAGCCGCCA ATGAAGGGCC GTTGCCCGAC
GAACACCTGC GAGCCATCTG GCGCGAGATC ATCTCCTCGT CGCGCAGCCT GCAACGCCCG
CAGCGTGTGG CCTACCTCGG CCCTGAAGGC ACCTTCTCGT ATTTCGCAGG CATGGAGTTC
CTCGGCAGGG CCATGGACTA CAGGCCGCAG CCCGGTCTGC CCGATGTGTT CCGCGCCGTG
CACGACCGCC AGTGCGAACT GGGCATCGTG CCGCTGGAGA ACTCGTTGCA GGGTACGGTG
GGGCAGAGTC TCGACCTCTT CCTGCAACAC GAGGTGTTCA TACAGGCCGA ACTCTTCTGC
CGCATCAGCC ACTGCCTGCT TGGCACGGCG GCGGCACTGG CGGACATCGA CACCGTGTAC
TCGCACCCGC AGCCGCTGGC CCAGTGCGGC GGGTGGCTGC GTGCGCACCT GCCCAACGCC
CGCATCATCC CCACCGAGTC CACCGCCGCG GCAGCGCGCA GGGCGGCGGG TGAGGCAGGG
GCCGCCGCCA TCGGTCACCG CAGTCTCGCC GACCTTCTCG GCCTCAACGT GCTGGAACGG
GGCATCGAAG ACCAGCCTGA CAACTGGACG CGCTTCGTGG TCATCGCCCC CGCCCCTGCC
GACCAGCAGG GACGCGAGAA GACATCCATG CTCTTCTCCC TGCCAGACAA GGCAGGTGCG
CTGGCTGGTG TGCTGGAACT GCTGGCGCGC GAGGGCATCA ACATGAAGAA GCTCGAGTCG
CGTCCCTTGC GGGGCGAGAA GTGGCAGTAC GTCTTCTTCG TGGACGTGGA ATGCGACCTC
GGCACTGAAC GGTACGCCCG TCTCGTCGAA GAACTGCGCA CGCTGTGCCA CACGTTGCGC
ATCCTCGGCA GCTACCCTGT GGGGCCGCAT TTCGACATGG CGGCGCATGA AGCGTTGCCC
GGTCTGCCCG ATCAGATAGG CCAGGGAGGC CTGTGA
 
Protein sequence
MSAPEPVNGT PPDVAQRLQA IRVTIDGLDR DLLALLNRRA ALSLEVGRIK ATDPGIVFRP 
FREREVFDNL EAANEGPLPD EHLRAIWREI ISSSRSLQRP QRVAYLGPEG TFSYFAGMEF
LGRAMDYRPQ PGLPDVFRAV HDRQCELGIV PLENSLQGTV GQSLDLFLQH EVFIQAELFC
RISHCLLGTA AALADIDTVY SHPQPLAQCG GWLRAHLPNA RIIPTESTAA AARRAAGEAG
AAAIGHRSLA DLLGLNVLER GIEDQPDNWT RFVVIAPAPA DQQGREKTSM LFSLPDKAGA
LAGVLELLAR EGINMKKLES RPLRGEKWQY VFFVDVECDL GTERYARLVE ELRTLCHTLR
ILGSYPVGPH FDMAAHEALP GLPDQIGQGG L