Gene Dvul_2456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2456 
Symbol 
ID4663342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2858950 
End bp2859735 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content65% 
IMG OID639820704 
Producthypothetical protein 
Protein accessionYP_967899 
Protein GI120603499 
COG category[R] General function prediction only 
COG ID[COG0390] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID[TIGR00245] conserved hypothetical protein TIGR00245 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.920559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.509679 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCAAG CCTACATCGA CATCAGCCTC GTGCAACTGG GCATCGCATC GGGCTTCGTG 
CTGCTGGTGG GGGTGCTTTC GCTGGTGCAG AGGCTGGGCC TCGGGCGCGA CCTCGCCGTG
GGTACGGTGC GCACCTTCGT GCAGCTCATC GCCATGGGGT ACCTGCTCGA GATCATCTTC
GGGCTTGAAG CGGCCTTGCC GGTGGTGGGC CTCTACGTGG TGCAGACATG GTTCGCGGCA
CGCATCGTGC GCGGGCGCGT GAAGGAGAGG TCGGTGGACT TCTTCGCCCC CACACTGATG
GCGGTACAGG GCAGCTTCTT TCTGGTGACC TTCTGCGTGA CGGCCTTCAT CATCGGCGCA
CAACCGTGGT GGAAGCCCCA GTACTTCATT CCCATCGGGG GCATGGTGGC CGGCAACTCC
ATGAACGCCC TGTCGCTGGC ACTCGACAGG CTCTTCTCCG ACCTGCGCAC CCGCCGTGCC
GAGGTGGAGA TGCGCCTTGG CCTCGGCGCC GACCCGCGCG AAGCCACCGA GGACATCTTC
CGTTCGGCCC TACGCACTGG CATGATGCCT TCCATCAATT CCATGATGGG GGTGGGGCTC
GTCTCGTTGC CGGGCATGAT GACGGGGCAG ATTCTGGCCG GGGCAGCCCC CGGTGCCGCC
GTGCGCTATC AGATCGTCGT CATGCTCATG CTGGTGGCAT CCACCGCGCT GGCGGCGTTC
ATCGTACTGC ATCTCGTGCG GGGACGTTGC TTCGGGCGGG CACAGGAGTT ACTCTTGAAA
GCGTAG
 
Protein sequence
MTQAYIDISL VQLGIASGFV LLVGVLSLVQ RLGLGRDLAV GTVRTFVQLI AMGYLLEIIF 
GLEAALPVVG LYVVQTWFAA RIVRGRVKER SVDFFAPTLM AVQGSFFLVT FCVTAFIIGA
QPWWKPQYFI PIGGMVAGNS MNALSLALDR LFSDLRTRRA EVEMRLGLGA DPREATEDIF
RSALRTGMMP SINSMMGVGL VSLPGMMTGQ ILAGAAPGAA VRYQIVVMLM LVASTALAAF
IVLHLVRGRC FGRAQELLLK A