Gene Dvul_2420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2420 
Symbol 
ID4664241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2816638 
End bp2816874 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content59% 
IMG OID639820668 
Productcarbon storage regulator, CsrA 
Protein accessionYP_967863 
Protein GI120603463 
COG category[T] Signal transduction mechanisms 
COG ID[COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) 
TIGRFAM ID[TIGR00202] carbon storage regulator (csrA) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.404461 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCATCC TCACACGTAA GGCGGGCGAG AGCCTGCACC TTGGTGACGA CATCCGCATC 
ACCGTCCTCG GCATACAGGG GAAGCAGGTG AAGATAGGTA TCGAGGTGCC CGGCGACATG
GTCGTCTACC GGGAAGAGGT GTACAGGCGC GTCATCGAAG AGAACCGTAT GGCGCTCGAC
ATCAGCAACG CAGACCTTCT GGCGGCGACG AAGATATGGC ACGGCAGAAC GAAATAG
 
Protein sequence
MLILTRKAGE SLHLGDDIRI TVLGIQGKQV KIGIEVPGDM VVYREEVYRR VIEENRMALD 
ISNADLLAAT KIWHGRTK