Gene Dvul_2402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2402 
Symbol 
ID4664229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2799230 
End bp2801641 
Gene Length2412 bp 
Protein Length803 aa 
Translation table11 
GC content62% 
IMG OID639820650 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_967845 
Protein GI120603445 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.623752 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCCG CACCCCCTGA GAACGGGCAC CGCCGCCACA AGCCTTATTC GCTCCAGATA 
CGGTTCATGC TCGGCCTCAT GGGCATCCTC GTCACCATGG GGCTGTTCTT CGCAGCCTCC
CTGTACATGC ACCTGAACCA GCTTGTGTCC GCCGAAGCCC GTTCCAAAGC CTCGCTCATC
CTCAGCCACG CCGAATCGGT GCAGAGTTAC GTGCGCAACA CGTTGCGCCC CGCCATGTAC
CGGGACCTGC CAGCCGACAG GTTCATCATC GAAGCCATGT CGACGTCGTT CGTCACCCGG
CACGTCATGA GCGACCCGGC TCACGGGAAC GAGGCATTCG AATACCGGCG TGTCGCCATC
GACGCCCGCA ACCCGTCCTT CGAAGCAGCC TCTCTGGAGC GTGGGCTCAT AGAACGCTTC
AAGGCCGACC CGACACTGAC CCGCATCGAA GAGACTGAAA ACGGCGAGAG GGGCGAACGG
TTCATAACCG CCCGCCCCGT CCGTTTCGAA GAAGCCTGCA TGAAATGCCA CGGTGCCCCG
GCAGATGCCC CCCCGCAACT GATCGCACTG TATGGCCCTG TGCGGGGCTT TGGCCGCTCC
CCCGGTGAAC TGGCGGGCAT CGACCTCGTA TCCATCGCCA TCGACGAATC ACTCAGTTCG
GCGAAGGAGG CCATAACCTC CTTCGCCACG CTCTTCGCCG TGGGCATGGT CATCCTCTTT
GCCATCATCC ACACGTTCTT CACGCGCCTT GTCGTCTACA ATCTGAGACG GATGGGAGCC
GCCATGCAAC GTCAGCTCGG CTTCGACGCG AACGGTTCCA TGCTCGACAG GCTGCGCCGT
GACGAAGAGA TTGAAGATGT CATCAACACC ATGGAAGGCT TCACACGACA ACTGGCACAG
GCTAGGCAGC AACTCAAAGA CTACGCGAGC AATCTCGAGT CGATGGTCGC GACGCGAACG
GCAGACCTTC AGGCGGAGGC CGACGCCCGG AGTGCCGATG TCGGGCTGTT CGTCGAACTT
CTCGCCGGAC TGAACCGCAG CCAGGGCAAG CACGACCTTC TCGGCACATC GCTCGAACTC
ATCGCCCGTC GCTTCAACGC TGCCAGCGCC GCATACGCCT GCCTGCTTTC GGGTACCGAG
TCATTCTCAT GGCCCGCAGA CGCAGCACCG CCACAACTGC CAGAGGACAT GGGGGTGCTC
CTTGGAGACG GCTTGCCGCG GCTCACACCC CGCGCGTGGT ACATCCCCGT CCAGACCACC
GAGACATCCC GTGGCCTGCT CTGCCTTTTC TGGCGCGAAG ACAGACCGCA CGGGCCGCGC
ACCCCTGAAC TGGCACAGGC ACTGGGACGT CAGCTGGGCA TCGCGCTCGA CAACATCGAC
GTGCTCGACA ACCTCCTGCG GCAGAACACC CTGCTCGACT CCATATTCGA AGGCATCTCC
GACCCCCTGC TGCTCCTTGA CGGTCACGGG GCCATCGTGT TTGCCAACGG GTCAGCCGAA
CGCATGGCAA AGGCGATACC GGGTGGTCTG CCGCGCCTTC TCGATGATGC AGGACTCCCC
GACGCCGTGG CGGAGCCTGC CCAGATGGAA ATCGCACTCG AGGATGGACG CTCGTTCGTC
ATCAACGTCT ATCCGCTTGC ACAGACACAC GGCAGGAACC GTAGCGTGGT CTACCTTCGT
GAGACGACGA GGGAAAAGCG CATGTTCGAC CAGATGCGGC AGCAGGAGAA GCTTGCCTCG
GTGGGACGCC TTGCAGCAGG GCTCGCCCAC GAGATCAACA ACCCCCTCGG CGTCATCATG
TGTTACGCCG AACTGCTCCA GACACAGGTC GGAGGCTCGC AGGCACGCCA TGACCTCGAC
ATCATCCTGC GACACACCCT TCAGGCCCAG CGTGTCGTCC GTGACCTGCT CGACTTCGCC
CGCCCCAAGG ACACACGCTG CGAGGCCTGT GACATCAACG ACGTGCTGTC CGATATCGTG
GAGATTTTCA TGCCGAAAGC CCGCAAGTCG GGCGTGAACG TCTCACTCGA CCTTGAACCC
GACCTGCCGC GTGTCTACGC TGACCGGGAC TCCCTGGGAC AGGTGTTCTC CAACCTGCTC
CTCAACGCCC TCGATGCCGT GCCGGAACGT ACAGGCACCA TTGCCATCAG CACCTGCGGC
AAGGGGTACG GTGTCACGGT GACCATCAGG GATAACGGGC CGGGCATCCC TGAAGCGCAC
CGCGACCGCA TCTTCGACCC TTTCTACACG ACGAAGGAAA CAGGACGCGG CACGGGTCTC
GGACTTGCCG TCGTCTATGG CATCATGCGC GACCTCAACG GCAACATCGA CGTCTCCACC
GACGACGGTG CCACATTCAT TCTTCACTTT CCTGCTGACG GAGACCCCCG CGACCATGCC
AACGACATGT GA
 
Protein sequence
MPSAPPENGH RRHKPYSLQI RFMLGLMGIL VTMGLFFAAS LYMHLNQLVS AEARSKASLI 
LSHAESVQSY VRNTLRPAMY RDLPADRFII EAMSTSFVTR HVMSDPAHGN EAFEYRRVAI
DARNPSFEAA SLERGLIERF KADPTLTRIE ETENGERGER FITARPVRFE EACMKCHGAP
ADAPPQLIAL YGPVRGFGRS PGELAGIDLV SIAIDESLSS AKEAITSFAT LFAVGMVILF
AIIHTFFTRL VVYNLRRMGA AMQRQLGFDA NGSMLDRLRR DEEIEDVINT MEGFTRQLAQ
ARQQLKDYAS NLESMVATRT ADLQAEADAR SADVGLFVEL LAGLNRSQGK HDLLGTSLEL
IARRFNAASA AYACLLSGTE SFSWPADAAP PQLPEDMGVL LGDGLPRLTP RAWYIPVQTT
ETSRGLLCLF WREDRPHGPR TPELAQALGR QLGIALDNID VLDNLLRQNT LLDSIFEGIS
DPLLLLDGHG AIVFANGSAE RMAKAIPGGL PRLLDDAGLP DAVAEPAQME IALEDGRSFV
INVYPLAQTH GRNRSVVYLR ETTREKRMFD QMRQQEKLAS VGRLAAGLAH EINNPLGVIM
CYAELLQTQV GGSQARHDLD IILRHTLQAQ RVVRDLLDFA RPKDTRCEAC DINDVLSDIV
EIFMPKARKS GVNVSLDLEP DLPRVYADRD SLGQVFSNLL LNALDAVPER TGTIAISTCG
KGYGVTVTIR DNGPGIPEAH RDRIFDPFYT TKETGRGTGL GLAVVYGIMR DLNGNIDVST
DDGATFILHF PADGDPRDHA NDM