Gene Dvul_2354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2354 
Symbol 
ID4662386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2745879 
End bp2747300 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content63% 
IMG OID639820602 
Productcarbon starvation protein CstA 
Protein accessionYP_967797 
Protein GI120603397 
COG category[T] Signal transduction mechanisms 
COG ID[COG1966] Carbon starvation protein, predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.322622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0377797 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCAA TGATGTATTT CTTCTTGAGC GTCGCTGCGC TCATCGGCGG GTACATGGTC 
TACAGCCGTG TCGTCGAACG CATGTTCGGC GTCGACAACT GCAAGGCCAC ACCAGCCTGC
ACCATGGCAG ACGGCGTCGA CTATGTGAAA CTGCCTCCCA GCAAGATCTT TCTCATCCAG
TTGCTGAACA TCGCAGGCCT AGGACCGGTG TTCGGCCCCA TTCTCGGTGC GTTGTACGGG
CCATGGGCGC TGGTCTGGAT CGTACTCGGA TCCATCTTCG CGGGGGGCGT GCACGACTAC
TTCTCGGGGA TGCTGTCGGT GCGCTACGAG GGCAAGTCCG TGCCCGACAT CGTGGGCTAC
AACCTCGGCA ACGGCTTCAA GCAGTTCATG CGCTTCTTCT CGGTGCTGCT GCTTCTGCTG
GTGGGCGTGG TCTTCGTCAC CGGCCCCGCC AAGCTGCTCG CCAACCTGAC CGACATGACG
CTGATGACAT GGGTCATCAT CATCTTCGCC TACTACTTCC TCGCCACGGT TCTGCCCATC
GACCAGATCA TCGGCCGTAT CTACCCGCTC TTTGCGGTCA TCCTCGTCAT CATGGCCGTG
GGTCTCACCG GGGCGATGAT CGTGAAGGGC TACGAGTTCT ATCCCTCTGC CCATTTCGTG
AACCAGCATC CCACGGGGCT GCCCCTGTGG CCGCTGATGT TCATCACCAT CGCCTGCGGC
GCCATCTCGG GCTTCCACGC CACGCAGTCG CCCATGATGG CGCGCTGCGT GCCTGACGAG
AACTGCGGTC GTCCCATCTT CTACGGTTCG ATGATCGCCG AAGGCGTCAT CGCCCTCATC
TGGGCGACGC TGGGTATGAG CTTCTACCCC ACCCCCGAGG CGCTCAACGC CGCCATCGCC
GCCGGTGGCC CCGGCAAGGT CGTCAATGAC GTGTCCATGA CGCTCATGGG CCCGGTGGGC
GGCATCCTCG CCATCCTCGG CGTGGTCGTG CTGCCTGTCA CTTCCGGCGA CACGGCCTTC
CGCTCGGCCC GCCTGACCAT CGCCGACGTG CTGAACTTCT CGCAGAAGGG CAACGGTGCC
CGTCTGATGA TCGCACTGCC ACTGTTCGTC ATCGGTGCGG TGCTGTCGCA GGTGAACTTC
GACATCATCT GGCGCTACTT CGGCTGGGCC AACCAGACGC TGGCGACCAT CGTGCTGTGG
GCGTCTGCGG CCTACCTCGT GCGTCGCGGC ATGCTCCACT GGATAGCCAG CGTGCCCGCC
ACGTTCATGA CGTGCGTGTG CGTGACGTAC ATCTGCTACG CCAAGATCGG CCTGAACATC
CCGCTGGACA TCTCCACGTG GATAGGCATC GCCGCCGCGG TGGGTTCGTT GGGCCTCTTC
CTCGTGAAGC GTCCGGCGTT CGCGGCGAAT CCCGTCGCCT AG
 
Protein sequence
MPSMMYFFLS VAALIGGYMV YSRVVERMFG VDNCKATPAC TMADGVDYVK LPPSKIFLIQ 
LLNIAGLGPV FGPILGALYG PWALVWIVLG SIFAGGVHDY FSGMLSVRYE GKSVPDIVGY
NLGNGFKQFM RFFSVLLLLL VGVVFVTGPA KLLANLTDMT LMTWVIIIFA YYFLATVLPI
DQIIGRIYPL FAVILVIMAV GLTGAMIVKG YEFYPSAHFV NQHPTGLPLW PLMFITIACG
AISGFHATQS PMMARCVPDE NCGRPIFYGS MIAEGVIALI WATLGMSFYP TPEALNAAIA
AGGPGKVVND VSMTLMGPVG GILAILGVVV LPVTSGDTAF RSARLTIADV LNFSQKGNGA
RLMIALPLFV IGAVLSQVNF DIIWRYFGWA NQTLATIVLW ASAAYLVRRG MLHWIASVPA
TFMTCVCVTY ICYAKIGLNI PLDISTWIGI AAAVGSLGLF LVKRPAFAAN PVA