Gene Dvul_2333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2333 
Symbol 
ID4662473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2721441 
End bp2723015 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content62% 
IMG OID639820580 
Productnitrite reductase (cytochrome; ammonia-forming) 
Protein accessionYP_967776 
Protein GI120603376 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3303] Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00114103 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATAACC AGAAGACGTT CAAGGGGTTG CGCCTCGCCG CGCTGGGACT CGTGGCCGTG 
GCCGCCTTCA CCGCAGGGTG TTCCGACGTG TCCACCGAAC TCAAGACACC CGTGTACAAG
ACGAAGCTGA CGGCGGAGGA AATCCGCAAC AGCGCCTTCA AGCCCGAGTT TCCCAAGCAG
TACGCCAGCT ACGAGCGTAA CGACGAGACT ACGGTGATGA CCGAGTACAA GGGCTCCGTG
CCGTTCAACA AGAACGACAA CGTGAATCCC CTGCCCGAAG GCTACAGGCA CGCGCAGCCG
TACCTGAAGA ACCTCTGGCT CGGCTATCCC TTCATGTACG AGTACCGTGA GGCGCGGGGC
CACACCTACG CCATTCAGGA CTTCCTGCAC ATCGACCGCA TCAACCGCTA CGCGGAGAAG
GGCGGACTGC CCGCCACCTG CTGGAACTGC AAGACCCCCA AGATGATGGA ATGGGTCAAG
GAGAATGGCG ACGGCTTCTG GTCGAAGGAC GTCAACGAAT TCCGCGACAA GATCGACATG
AAGGACCACA CCATCGGGTG TGCCACCTGT CACGACCCCC AGACCATGGA ACTGCGCATC
ACCAGCGTGC CGCTCACCGA CTACCTCGTC TCGCAGGGCA AGGACCCCAA GAAGCTGCCG
CGTAACGAGA TGCGCGCACT GGTATGCGGT CAGTGCCACG TGGAGTACTA CTTCAACGGC
CCCACCATGG GCGTGAACAA GAAGCCGGTG TTCCCGTGGG CCGAGGGTTT CGACCCTGCC
GACATGTACC GCTACTACGA CAAGCACGGC GACCTGCAGG TGAAGGGCTT CGAGGGCAAG
TTCGCGGACT GGACGCACCC CGCCTCCAAG ACGCCCATGC TCAAGGCCCA GCATCCCGAG
TACGAGACAT GGATCAACGG CACACACGGG GCGGCGGGCG TCACCTGCGC CGACTGCCAT
ATGAGCTACA CCCGCAGCGA CGACAAGAAG AAGATATCGT CGCACTGGTG GACTTCGCCC
ATGAAGGACC CCGAGATGCG TGCCTGCCGC CAGTGCCACT CCGACAAGAC CCCCGACTAC
CTCAAGTCGC GTGTGCTCTT CACCCAGAAG CGCACCTTCG ACCTGTTGCT GGCGGCGCAG
GAAGTGTCGG TGAAGGCGCA TGAAGCGGTA CGCCTCGCCA ACGAATATCA GGGCGCCAAG
GCCGCAGGCT ACGACGACCT GATGATCCAG GCCCGCGAGA TGGTCCGCAA GGGACAGTTC
TTCTGGGACT ACGTGTCCGC CGAGAACAGC GTGGGCTTCC ACAACCCCGC CAAGGCACTC
GACACGCTGG CCCAGTCGCA GCAGTTCAGC CAGAAGGCCA TCGACCTTGC CATGGAAGCT
ACGCAGTATG GCATCGGCAA GGACCTCACG GGCGACATCA AGACCATCGT GCCGCCCATC
CTGAAGATGA ACCGCAAGCT GCAGCAGGAC CCGGAATTCA TGAAGACCCA CAAGTGGTTC
CAGTACCTGC CCGTGCTGCC CAAGGCCGAT CAGGTGTGGG ACGGACAGAA GCGTCTGGTC
TCCGCCAAGC AGTAG
 
Protein sequence
MNNQKTFKGL RLAALGLVAV AAFTAGCSDV STELKTPVYK TKLTAEEIRN SAFKPEFPKQ 
YASYERNDET TVMTEYKGSV PFNKNDNVNP LPEGYRHAQP YLKNLWLGYP FMYEYREARG
HTYAIQDFLH IDRINRYAEK GGLPATCWNC KTPKMMEWVK ENGDGFWSKD VNEFRDKIDM
KDHTIGCATC HDPQTMELRI TSVPLTDYLV SQGKDPKKLP RNEMRALVCG QCHVEYYFNG
PTMGVNKKPV FPWAEGFDPA DMYRYYDKHG DLQVKGFEGK FADWTHPASK TPMLKAQHPE
YETWINGTHG AAGVTCADCH MSYTRSDDKK KISSHWWTSP MKDPEMRACR QCHSDKTPDY
LKSRVLFTQK RTFDLLLAAQ EVSVKAHEAV RLANEYQGAK AAGYDDLMIQ AREMVRKGQF
FWDYVSAENS VGFHNPAKAL DTLAQSQQFS QKAIDLAMEA TQYGIGKDLT GDIKTIVPPI
LKMNRKLQQD PEFMKTHKWF QYLPVLPKAD QVWDGQKRLV SAKQ