| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2324 |
|---|
| Symbol | |
|---|
| ID | 4662808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | + |
|---|
| Start bp | 2710269 |
|---|
| End bp | 2711855 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639820571 |
|---|
| Product | dolichyl-phosphate-mannose-protein mannosyltransferase family protein |
|---|
| Protein accession | YP_967767 |
|---|
| Protein GI | 120603367 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.578416 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000207214 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | GTGCGCGAAC ACCACCACAA TCTCCGGCAC TACACGCTCT ACGCCGCGAC CATCATCACC
ATCACCACGC TCGTCCGCTT CTGGTTCGTC GCGTCAGGGC AACTCGACCT CGTGCAGGAC
GAGGCCCAGT ACTGGGACTG GACCCGGCGG CTGCAACTCT CGTACTACTC CAAGGGCCCG
CTCATCGCAT GGCTCATCGG GATGTGGACT GGCGTGTTCG GCGACACGGA ACTCGGTGTC
CGGTTCGGCG CACTGGCAGG TTCGGCACTG GCGCAGGTCA TGCTCTTTCT CGGCGTGGGC
AGGCTCTTCG GCAGGCCCCG CCTCGCCCTG CTCACCCTCG GCGTAGCCAA CACCACCCCC
CTGTTCATGG TGGCGGGGGT GCTCATGACC ACCGACGGCC CGCTGCTGCT GTGCTGGCTG
GGGGCTCTAC TGTGCATCCA CGCGGCCACG CGCACACCGC GCGCCACAGC CCCCTATCTC
CTTCTCGCCA TGTGCATGGC TGTCGGCGTA CTGGCCAAGT ACATGATGCT CGCCGTGGCG
GCCATCGCCT GCCTGCACAT GTGGCTGTTG CACCGGCAGA GACTGCTGCC GCAAGGGGTC
GCCTTGCGTG TCGTGTGCGC CTGCCTTGCG GGCGCGGCCT GCGGCATGTT GCCCATCCTG
CTATGGAACG CCCAGAACGA CTGGGTGGGG TTCAAGCACG TGGGCACCCT CGCCGGGGTC
ACCGGCAAGG CCAGCAAGGC CTTTCTGCGA CTGGACAGAC TGCCGGAACA CCTCGGCGCG
CAACTGGGCG TTGCCACACC ATGGTGGCTG CTGCTCATGC TGGGCATGGC ATGGCGTTCG
CTGCGCATCG CCTGGACGGG CGTCGTCCCT CCCGGCGAAC CTGCAGAGGC GGCGGGCCGC
GAAGAGGCCG TACGCCAGTC GTCATTGCTG TTCTGTGCCT TCATGCCGCT ATGGGGCGTC
ATCACGCTAT GGAGTCTGCA CACCCGCATC TACCCCAACT GGCCCGCCAT GAGCTATGTG
GGCGGCATCA TCCTTGCCGC CGCCGGGGTT GAACGCCTGC TTGACGGCCT CGGTGCACCG
CGCTGGCGAC GCCTCGTGCC GCTGTGGTTC ACACTGGGCG CCTGTCTGTT CGCCGCCGCA
CATTTCCAGA ACACCCTGCC CTTGCCCGCC TCGCTCAACC CGGCCGCACG GCTGAAGGGA
TGGGAGGACC TCGGGCGTGA ACTCGACAGG GTACGGCACG GGCTGCCACA CCCTGACAGG
GTGTTCTTCT TCTCCGACGC CTACGACATC ACGGCCGAAC TCGCGTTCTA CGTACCCGGC
AAACCGTTCA CCTTCTGCGC CGACTTCGGC CGGCGCATGA GCCAGTACGA CCTGTGGCCC
TCACCCGCCG ACAAGGTGGG CTGGGACGCG GTCTTCGTCC GCCGCGACGG GACGAGCGTG
CCGCGCGAAC TGCTCGAGAT GTTCGACTCT GCGGAACTGT ACCGCTACCA GTCGACGCAT
CACGGGGCAC CGGGACGGGT CTTCACCGTC ATCGTCCTGC GCGGCTTCAA CGGCGAATGG
CCGCGCCGGA GTTTCAGGTC GTTCTAA
|
|---|
| Protein sequence | MREHHHNLRH YTLYAATIIT ITTLVRFWFV ASGQLDLVQD EAQYWDWTRR LQLSYYSKGP
LIAWLIGMWT GVFGDTELGV RFGALAGSAL AQVMLFLGVG RLFGRPRLAL LTLGVANTTP
LFMVAGVLMT TDGPLLLCWL GALLCIHAAT RTPRATAPYL LLAMCMAVGV LAKYMMLAVA
AIACLHMWLL HRQRLLPQGV ALRVVCACLA GAACGMLPIL LWNAQNDWVG FKHVGTLAGV
TGKASKAFLR LDRLPEHLGA QLGVATPWWL LLMLGMAWRS LRIAWTGVVP PGEPAEAAGR
EEAVRQSSLL FCAFMPLWGV ITLWSLHTRI YPNWPAMSYV GGIILAAAGV ERLLDGLGAP
RWRRLVPLWF TLGACLFAAA HFQNTLPLPA SLNPAARLKG WEDLGRELDR VRHGLPHPDR
VFFFSDAYDI TAELAFYVPG KPFTFCADFG RRMSQYDLWP SPADKVGWDA VFVRRDGTSV
PRELLEMFDS AELYRYQSTH HGAPGRVFTV IVLRGFNGEW PRRSFRSF
|
|---|
| |