Gene Dvul_2290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2290 
Symbol 
ID4663014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2670890 
End bp2672182 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content56% 
IMG OID639820536 
ProductO-antigen polymerase 
Protein accessionYP_967733 
Protein GI120603333 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3307] Lipid A core - O-antigen ligase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGTTC GCCAGTCTGC CTTGCGGTCA GTGGCCCTGA AATTATCGTC GTATCAAGAG 
ACGTCGGTCA GGATTGGTCG CATGCATTTT TCTAGTCGAT TCACTATGGA AGGCCTATTC
CTTGGAATGC TGACAGGGCT TTTTGTGATG CTCGGGCTGA ACAGGGGGGT CTATCCCTTC
ATGTGGGGGG CAGGCATCAC GGCCCTGTTC CTGCTTTACC GTGTCTGCCG AAGGTCCGAG
ATGGCATGCT TCGCCCAGGT GGCCTTGTTG CCTTTTGTCT TTATCGGCTA CGTCATGTTG
TCACCATCCG ACTTCGGTGC GGATTTCCCC CTTGGGGGGA TGTATCTATG TGCGTATCTC
ACCGGCTTGA GCCTCGGTTT TGTCCGTCCT CGCGCCATGT GGATTCCATT GCTGGGCCTC
GCTCTTGTCA TAGTCTTGTC TCTGCCTGTC GGATGGCTGG TCGTGGGGCG AGACACTCTT
TTTTTTCATG GTCGTCTTAA GCTTTTCTTT CATCATCCTG CGGTGCTTGC CACATTGGCT
CTGTGGTGTG CCCTGTATCT GGTCACATCG TGGCGCGATA TCCCGGGGCA ATGGCGTTGG
GTGTGGAGTT GTGCCGCCGG GGCTTGCGTG GTGTTCGCCG TATTGTCCAT GGCACGAGCG
CCGCTGTTCG GGTTCATGGC CGCGGTAACA GTGCTGTTTG TCCTTCGCTG GAAACGGGTG
GGGCTGCGTT TCCTTGTGGC ATGCATGGTG TTGGTTGGGA TTGGGGTCGT GCTGTTGTCT
GCAGGTGAAC GGGGGCGTCT CGTGGCCAGT ATCGCAGCCC CGTTGGAACA GCCAAGCCTG
ATTTCGCGAA AGCCCATATG GGAAGCCGCA TGGAGCGGTT TTGTCGAGTC TCCTTTGCTC
GGCAACACAC TGTCTGCGTT TCATTCCCAT TATGAGGAGT ATATCACTAC GAATGAAGAG
CGGCTGCACG CCCAATACCC GGTCGTCGAG AGGTCCTTGC GGTATCCGCA TAGTACCTAT
CTGGCCGTGC TCTTCGGCTT CGGTCTTTTC GGCACCCTAC TGCTTGTGGT GGCTTTCGTG
CCAGCAGTGT ACCTTTCTTT GAGGGCAAAC GACCTGTTCT TGCCGTGTGT CGTCGTATTC
ATGCTTGTAT ACGGCACGGT GGAGGCATCG CTCCATCGCA AGGATGGTGC TATGGAACTC
TTCTTCCCTC TCGGTGTGGC CTGTGGTCGG CTGGTTAGCC GTGAAAGACG GGAGCCTGAC
GTCATCGCCA AGGCGCAAAC GCTGCCGTCC TGA
 
Protein sequence
MVVRQSALRS VALKLSSYQE TSVRIGRMHF SSRFTMEGLF LGMLTGLFVM LGLNRGVYPF 
MWGAGITALF LLYRVCRRSE MACFAQVALL PFVFIGYVML SPSDFGADFP LGGMYLCAYL
TGLSLGFVRP RAMWIPLLGL ALVIVLSLPV GWLVVGRDTL FFHGRLKLFF HHPAVLATLA
LWCALYLVTS WRDIPGQWRW VWSCAAGACV VFAVLSMARA PLFGFMAAVT VLFVLRWKRV
GLRFLVACMV LVGIGVVLLS AGERGRLVAS IAAPLEQPSL ISRKPIWEAA WSGFVESPLL
GNTLSAFHSH YEEYITTNEE RLHAQYPVVE RSLRYPHSTY LAVLFGFGLF GTLLLVVAFV
PAVYLSLRAN DLFLPCVVVF MLVYGTVEAS LHRKDGAMEL FFPLGVACGR LVSRERREPD
VIAKAQTLPS