Gene Dvul_2286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2286 
Symbol 
ID4663289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2665592 
End bp2666479 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content62% 
IMG OID639820532 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_967729 
Protein GI120603329 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAGGC GTTGTGGAGT ATCGCGCGCC GCCCTCATGC TGGATGTGGC CTTTCTTCTT 
GTGCTCGTGG GCGGGGCCGC ATGGTTCGTG TGGCGCATGG ACGATGTGAT CCATTACCGC
TGGCATTGGG GGCGGGTTCT CGAAGGGCTG GTGTATGTCA CTCCGCAGGG AGAATGGCAT
GCCGGGCCGC TGGCAAGAGG GCTGGCAGGC ACGGTGCGCC TCAGCCTGTG GGCCATGCTT
GCGGCGTTGC TGCTCGGCAC GGTGGCAGGT CTTCTGCGTA CCCGGAGGCG TTTGCTGGCC
CGCCTTCTTG CTGGAACCTA CGTGGACAGC GTCCGCAATC TTCCGGCGCT GGTGCTGATT
TTCGTGATGT ACTTCTTCAT CAGTTCGCTG GTGCTGCCAG CACTGGGGCT CGAGGAATCC
GTCCGGGGAC TTCCTCCGGG GGGGCGTGCG GTCGTCGGCT GGCTGTTCGC CCCCGTGGAG
CAACTCTCGG CCTTCCTGTC TGCGGTGGTG ACGCTTGCCA TCTACGAAGG GGCCTACATC
TCGGAAATCG TCAGGGCTGG CATCGAGAGT GTGCCGCGAG GACAGTGGGA CGCCTCCTCA
TCGTTCGGTC TCGGACCTGT GCAACAGATG CGCCACGTGA TTCTGCCGCA GGCCCTGCGC
CATGCCGTTC CTCCCCTTGC GGGGCAGTTC ATCTCCATCA TCAAGGACTC TGCCATCGTG
TCGGTCATCT CCGTTCCGGA ATTGACCTTC CAGGGTATGG AACTCATGGC CGCCACCTAT
CAGACCTTCG AGATATGGAC GACCATCGCC CTGTTGTACC TCGTTCTCAC TCTGGGCTGT
TCTCTCGTGG CGGAAAGGCT TGAAAGGCGC TTCAGGTGGG GTCTGTAG
 
Protein sequence
MPRRCGVSRA ALMLDVAFLL VLVGGAAWFV WRMDDVIHYR WHWGRVLEGL VYVTPQGEWH 
AGPLARGLAG TVRLSLWAML AALLLGTVAG LLRTRRRLLA RLLAGTYVDS VRNLPALVLI
FVMYFFISSL VLPALGLEES VRGLPPGGRA VVGWLFAPVE QLSAFLSAVV TLAIYEGAYI
SEIVRAGIES VPRGQWDASS SFGLGPVQQM RHVILPQALR HAVPPLAGQF ISIIKDSAIV
SVISVPELTF QGMELMAATY QTFEIWTTIA LLYLVLTLGC SLVAERLERR FRWGL