Gene Dvul_2266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2266 
Symbol 
ID4663736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2640751 
End bp2641323 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content62% 
IMG OID639820512 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_967709 
Protein GI120603309 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.941279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATCA CAGAAACCGG ACTTCCCGGG TTACGGCTGC TTACGCCACA GGCCCACCGG 
GACGAACGTG GCTTTTTTCT TGAGACCTAC CGGGAGTCGT TCTTCGACAC CCTGACGCAC
GGTCAGCGCT TCGTGCAAGA CAACCACGCG CGTTCGGAAG ATGCGGGTGT CCTGCGCGGG
CTGCATTTTC AGCTTCCTCC CATGACGCAG GCAAAACTCG TCTGGGCCGT CCAGGGTTCC
ATCTATGATG TCGCCGTCGA CCTGCGCGAG GGCTCGCCCA CCTTCGGACG CTGGTTCGGC
TGCACCCTCA CCGCCGCATC GTTCCAGCGG ATCTATGTGC CACGCGGCTT CGCCCATGGC
TACATGACGC TCGAACCGGG AACGGAGGTC ATGTACAAGG TCGACGCCTA CTATGCCCCG
GCACTGGAAC AGGGGCTGCC GTGGAACGAC CCGGACATCG GCATCACATG GCCCGACATG
ACACCCATCC TGTCTGCCAA AGACCAGCGG CACGGCACCT TCCGCGACTT TCGCACCCCC
TTCAGCTTCA CTCCCGACAC GGAGCACGCA TGA
 
Protein sequence
MHITETGLPG LRLLTPQAHR DERGFFLETY RESFFDTLTH GQRFVQDNHA RSEDAGVLRG 
LHFQLPPMTQ AKLVWAVQGS IYDVAVDLRE GSPTFGRWFG CTLTAASFQR IYVPRGFAHG
YMTLEPGTEV MYKVDAYYAP ALEQGLPWND PDIGITWPDM TPILSAKDQR HGTFRDFRTP
FSFTPDTEHA