Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_2265 |
Symbol | |
ID | 4663739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 2638895 |
End bp | 2640574 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639820511 |
Product | histidine kinase |
Protein accession | YP_967708 |
Protein GI | 120603308 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.592554 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAGAG AGTTACACAC TGACGGGGAA GGCGATACTG CGGCCCATGC GCGCATCGCT GCACTTGAGG CCGAGGTTGA GGCCTTGCGT GCACGGGAAC GGACGTTGCG CGATATTCTT CTTTCCATTC CCGACATGAT CACCGTGCAC GACCGTAACG AGAGCATCGT GTTCAGCAAC TGGAAGGGTG ACGACCTCTA CTGGGAGAAC CTTGGCGGTG AACGGCACGG AAGTCGGTGC TACGGCTGCT ACTTCAGGGG GGAGAAGCAG TGCGACGCCT GTCAGATTGC CGAAGTCTTC GATACGGGCG TGCAGAAGAG CATCGAGCTT TACAACCCCG AGATTCGGGC CTTCAGGTCC ATCACGGTCT TCCCGGTACA CAACGCCGCT GGTGAGGTCG TGATGGTGGC CGAGTATGTG CGGGACGTGA CCGCCACGCG GCGTATGGAA CGCGAACTGC GCGTTGCCAA AGAGGCGGCA GAGGCCGCGG ACAAGGCCAA GAGCGAGTTT CTCGCCTCCA TGAGTCACGA GATACGCACC CCCATGAACG GAGTGCTCGG CATGCTCGAC CTTGCGCTTG ATACGCGCCT CGACGATGAG CAGCGCGATT ATCTCGAGGC GGCACAGAAT TCGGCCGAAT CGCTGCTCGC GCTCATCAAC GACATCCTCG ACTTCTCCAA GATCGAAGCC GGCATGGTGG AACTGGACAG TCAGGCCTTC AGGCTACGTA AACGCCTCTC CACCCTGCAC ACCATGTTCG TGCACCGGGC AGAGGAGAAG GGCCTCGCCT TCGGGTTCCG CATCGGTGAA GAGGTGCCGG ACGGGCTGGT GGGCGACCCC ATGCGGCTGC GACAGGTGCT GGTCAACCTG CTGGACAATG CCATCAAGTT CACCGAGCAG GGGCGGGTGT ATCTGGACGT GCAGCTTGAT GCAGCCCAAG GCGCGCTTCC GGCCGAAGGC GAGCCGATAC TCCTGCGTTT TTCGGTCACG GACAGCGGGC CGGGTATTCT GGAAAGCCAT CGCGAGCATA TCTTCGAACG CTTCGTGCAG GCCGATGGTT CGCTGTCGCG CAGGCATCGC GGCACGGGGC TGGGCCTTGC CATCTGCAAA CGGCTGGCGA CGCTCATGGG GGGTGACATC ACGGTGGAAA GTGCTCCGGG CAGCGGCAGC ACGTTCACCT TCACGGCGTC GTTCGAACGC GCCTCCTTCG ACGGTGCCGC TGACGACCGC AAACTGGCGC GTCAGCCGCA GAAGCCCGTG ACCCCGGCGC GCATCCTCGT CGCCGAGGAC CATCCCATGA ACCTCATGTT CATCGAGAAG CTTCTTGCCA AGCAGGGCTA CGAGGTACAC ACCGTCACCG ATGGCACCGA AGTGCTGCCC GCGTTGCAAC GCGAGCGGTT CGACCTTGTA CTCATGGACA TCGCCATGCC GGTCATGGAC GGTATCGAAG CTACCCGTAG TGTGCGTCAG GCCGGGAACA TGATCACGGA CAAGAACGTG CCCATCATCG CCATGACAGC CCATGCCATG AAAGGCGACC GTGAACAGTT CCTTGCCGCG GGCATGGACG ACTACATCGG CAAGCCCATC AATTCAGACA ATCTCTGCAA CATGCTGCTG AAGCACCTGC AGCGTGCGCG CAGGGCGGCG GAGTGCGCTT CGGCGTCATC TCCGGCTTGA
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Protein sequence | MARELHTDGE GDTAAHARIA ALEAEVEALR ARERTLRDIL LSIPDMITVH DRNESIVFSN WKGDDLYWEN LGGERHGSRC YGCYFRGEKQ CDACQIAEVF DTGVQKSIEL YNPEIRAFRS ITVFPVHNAA GEVVMVAEYV RDVTATRRME RELRVAKEAA EAADKAKSEF LASMSHEIRT PMNGVLGMLD LALDTRLDDE QRDYLEAAQN SAESLLALIN DILDFSKIEA GMVELDSQAF RLRKRLSTLH TMFVHRAEEK GLAFGFRIGE EVPDGLVGDP MRLRQVLVNL LDNAIKFTEQ GRVYLDVQLD AAQGALPAEG EPILLRFSVT DSGPGILESH REHIFERFVQ ADGSLSRRHR GTGLGLAICK RLATLMGGDI TVESAPGSGS TFTFTASFER ASFDGAADDR KLARQPQKPV TPARILVAED HPMNLMFIEK LLAKQGYEVH TVTDGTEVLP ALQRERFDLV LMDIAMPVMD GIEATRSVRQ AGNMITDKNV PIIAMTAHAM KGDREQFLAA GMDDYIGKPI NSDNLCNMLL KHLQRARRAA ECASASSPA
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