Gene Dvul_2265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2265 
Symbol 
ID4663739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2638895 
End bp2640574 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content62% 
IMG OID639820511 
Producthistidine kinase 
Protein accessionYP_967708 
Protein GI120603308 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.592554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGAG AGTTACACAC TGACGGGGAA GGCGATACTG CGGCCCATGC GCGCATCGCT 
GCACTTGAGG CCGAGGTTGA GGCCTTGCGT GCACGGGAAC GGACGTTGCG CGATATTCTT
CTTTCCATTC CCGACATGAT CACCGTGCAC GACCGTAACG AGAGCATCGT GTTCAGCAAC
TGGAAGGGTG ACGACCTCTA CTGGGAGAAC CTTGGCGGTG AACGGCACGG AAGTCGGTGC
TACGGCTGCT ACTTCAGGGG GGAGAAGCAG TGCGACGCCT GTCAGATTGC CGAAGTCTTC
GATACGGGCG TGCAGAAGAG CATCGAGCTT TACAACCCCG AGATTCGGGC CTTCAGGTCC
ATCACGGTCT TCCCGGTACA CAACGCCGCT GGTGAGGTCG TGATGGTGGC CGAGTATGTG
CGGGACGTGA CCGCCACGCG GCGTATGGAA CGCGAACTGC GCGTTGCCAA AGAGGCGGCA
GAGGCCGCGG ACAAGGCCAA GAGCGAGTTT CTCGCCTCCA TGAGTCACGA GATACGCACC
CCCATGAACG GAGTGCTCGG CATGCTCGAC CTTGCGCTTG ATACGCGCCT CGACGATGAG
CAGCGCGATT ATCTCGAGGC GGCACAGAAT TCGGCCGAAT CGCTGCTCGC GCTCATCAAC
GACATCCTCG ACTTCTCCAA GATCGAAGCC GGCATGGTGG AACTGGACAG TCAGGCCTTC
AGGCTACGTA AACGCCTCTC CACCCTGCAC ACCATGTTCG TGCACCGGGC AGAGGAGAAG
GGCCTCGCCT TCGGGTTCCG CATCGGTGAA GAGGTGCCGG ACGGGCTGGT GGGCGACCCC
ATGCGGCTGC GACAGGTGCT GGTCAACCTG CTGGACAATG CCATCAAGTT CACCGAGCAG
GGGCGGGTGT ATCTGGACGT GCAGCTTGAT GCAGCCCAAG GCGCGCTTCC GGCCGAAGGC
GAGCCGATAC TCCTGCGTTT TTCGGTCACG GACAGCGGGC CGGGTATTCT GGAAAGCCAT
CGCGAGCATA TCTTCGAACG CTTCGTGCAG GCCGATGGTT CGCTGTCGCG CAGGCATCGC
GGCACGGGGC TGGGCCTTGC CATCTGCAAA CGGCTGGCGA CGCTCATGGG GGGTGACATC
ACGGTGGAAA GTGCTCCGGG CAGCGGCAGC ACGTTCACCT TCACGGCGTC GTTCGAACGC
GCCTCCTTCG ACGGTGCCGC TGACGACCGC AAACTGGCGC GTCAGCCGCA GAAGCCCGTG
ACCCCGGCGC GCATCCTCGT CGCCGAGGAC CATCCCATGA ACCTCATGTT CATCGAGAAG
CTTCTTGCCA AGCAGGGCTA CGAGGTACAC ACCGTCACCG ATGGCACCGA AGTGCTGCCC
GCGTTGCAAC GCGAGCGGTT CGACCTTGTA CTCATGGACA TCGCCATGCC GGTCATGGAC
GGTATCGAAG CTACCCGTAG TGTGCGTCAG GCCGGGAACA TGATCACGGA CAAGAACGTG
CCCATCATCG CCATGACAGC CCATGCCATG AAAGGCGACC GTGAACAGTT CCTTGCCGCG
GGCATGGACG ACTACATCGG CAAGCCCATC AATTCAGACA ATCTCTGCAA CATGCTGCTG
AAGCACCTGC AGCGTGCGCG CAGGGCGGCG GAGTGCGCTT CGGCGTCATC TCCGGCTTGA
 
Protein sequence
MARELHTDGE GDTAAHARIA ALEAEVEALR ARERTLRDIL LSIPDMITVH DRNESIVFSN 
WKGDDLYWEN LGGERHGSRC YGCYFRGEKQ CDACQIAEVF DTGVQKSIEL YNPEIRAFRS
ITVFPVHNAA GEVVMVAEYV RDVTATRRME RELRVAKEAA EAADKAKSEF LASMSHEIRT
PMNGVLGMLD LALDTRLDDE QRDYLEAAQN SAESLLALIN DILDFSKIEA GMVELDSQAF
RLRKRLSTLH TMFVHRAEEK GLAFGFRIGE EVPDGLVGDP MRLRQVLVNL LDNAIKFTEQ
GRVYLDVQLD AAQGALPAEG EPILLRFSVT DSGPGILESH REHIFERFVQ ADGSLSRRHR
GTGLGLAICK RLATLMGGDI TVESAPGSGS TFTFTASFER ASFDGAADDR KLARQPQKPV
TPARILVAED HPMNLMFIEK LLAKQGYEVH TVTDGTEVLP ALQRERFDLV LMDIAMPVMD
GIEATRSVRQ AGNMITDKNV PIIAMTAHAM KGDREQFLAA GMDDYIGKPI NSDNLCNMLL
KHLQRARRAA ECASASSPA