| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2248 |
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| Symbol | |
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| ID | 4663784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 2612404 |
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| End bp | 2615214 |
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| Gene Length | 2811 bp |
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| Protein Length | 936 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639820493 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_967691 |
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| Protein GI | 120603291 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.237382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.945372 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTAT ATTTCGTTAT AACCTTTCAT CCGGCCGGGG GTCGTGTGTT CCTGCTCCGC
GTCGTCCTGT TCCTGCTCAT CTACGCGTCG CTTTCTGGGC CAGTGCTGGC TGCGGGAGAG
AAGCGCGTGC TCGTGCTCGA ATCGGGCTGG CATGACTGGC ACTGGGCAGG AGAGTTCGCA
CGAGGTGTAC ACTGGGTTTT CGATGCGACA CCCGGCGTCG ATGTGGTGCA GAACCGTATC
GACCTTCCCC ATGCCACCAC ACCTTCCTAT GAGGCCATGC TGGCCGACCT TCTGGTGGCC
CGCTATCGCG ATGACATGCC GGATGTCGTC ATCGCCGGTG ACGACAGGGT TTCGAAGTAC
CTCGATACCT ACGGGGCGGA CATCTTTCCG CATACCCCGA AAGTCTATTG CTACGTCCTG
CCGGGGGGGG GCAGGGTGCA GGGCGTCCTC GCGGGGGGGG TGGTTTCGAC ACCCGACGTG
GCGGGTACGC TGCTTCTGAT GCGCCAGATG CAGCCGCGTC TTTCGCATGT GCTTGTCGTG
AATGACAGGT CTTCAGGGAC GGAGGTCATC GCAGATGAGG TGCGGCGGGC TGCGGCTACC
GCCCTGCCGG GGGTGACGCT GGCGTTCATC GACCAGTGGA CGGTCGCTGA ACTGGCTGCC
CGTCTGAGGA GCCTTTCGCC CGGGAGTGCG GTGCTGTTCA CCTCCCTTGA GCAGGATGCG
GTGGGCGTAC GCATCGGGAG TCGCGACCTG CAGATGCTGA CGGCCGTCTC CTCCGTCCCT
GTCTACAGCC TGTGGGACTG GCATGTGCGG CTTGGTGCCG TGGGAGGTGT CGTTTCCGAC
GGCATGGGCG TCGGTGGCCG CATCGCCCGT ATCGCCCAGC GCTGGCTGAA CGGCCTTGAG
CCGCATCTCG GTGTCGAAAG CACATCGATC AACATCACTC TTGTCGATGC GCTGACCATG
GCGCGTTTCG GCCTCGCCAC AGGCGGGCTG CCGGTCGGCG CGTCGGTGGT CAACAAACCC
CCGGATATGC GTGAAGCGGC CCCCGGGCTC TTCTATGGCG GGCTTGTCGT ACTGCTAGTG
TTGTCTCTCG TCGTGGCCGG TCTTGGCCTG AATACCCTTC AGCGGCGCAA GGTCATGCGG
CGTCTGTCAG CGGCGGAGTC GCGTTATCGG TCGCTGTTCG AAAACGCGCT GGAGGGTATC
TTCAGGTTCT CTCCGACGCA GGGAATACTG GCGGCCAACC CTGCTTTCGC CTCCATGCTG
GGCTATGGCG GTGTCGAAGG GCTGCTGGCC GATGCCGGTG GCAGCATGCA CAGTCTTTTC
GAGAGTGACG AAGAGTACGC CACGCTACTC TCGCGACTTG AAACGGACGA GGTCCTGCGC
GGGGTCGAAT GCCGCCTGCG CAGGCGCGAC GGGACGAGTA TCGTCGCGGC CCTGTCGTTG
CGCGCTGACC GTGGGGCCGA CGGGGACATC ACTCTTGTCG AAGGGCGGGC TGTTGACGTC
ACGGCCGAGA AGCAGGCCCG CGCCGACCTC GAAGTGCAAC GTGAACGGCT GCGGCTGGCC
CTTGACGCTT CGCGTGACGG CATATGGGAC TGGGATACCG TGAACGATAC GGTGCACTTC
AGTTCTCGGT ATTTCACCAT GCTCGGTTAT GCCCCGGATG CGTTCGCGAA CGAACTTGCC
GTTTGGCTCG ACCTGTTGCA CCCGGAAGAC CGGGACGAGG CCGTCGAGCG TGCCCGCCGT
TTCGTCGAAG GGGTGGCTGA CGGCGATGCC TATGAGACGA CCTTCAGGCT GCGGGCGGCG
GACGGGGCGT ATCGCTGGGT TCTGTCACGC TCCATGGCTG CCGCACGCGA CATGAATCGC
CGCGCCATCC GTGTTGTGGG TGTGCATACG GACGTGACCG AATTGCGAGA GGCGCAAGAG
CAGCTTGCGA GCTTCAACCG TGAGCTTGAA GAACGTGTCA AACAGCGTAC CCGTGAACTT
CGTGAGGCGA ATCAGGCCCT CGAGTTCTCG CTGGACGCCG TACGGCGGAT GCAGGACGAA
CTCGTCCAGT CCGAGAAGAT GGCGTCGCTT GGAGGACTGG TTGCCGGAGT TGCCCACGAG
ATCAATACTC CTGTGGGCAT AGGGGTCACT GCGGGGTCGT GGCTTGCGGA GAAGACCGAA
GAACTCTCGC GGCAACTGGC TGCCAATACC ATGCGCAAGT CCGACCTTGA ACGGTACATC
GAAACCGCGC GGGAATCGTC TGCGACCATT CTCTCCAACC TCAAGCGCGC GGCAGACCTC
GTGCAGAGTT TCAAGCAGGT CGCCGTCGAC CAGACCGCTG CTGAAGCCCG CGAGTTCAAC
CTGCGTCAGT TCCTTGATGA GGCACTGATG AGCCTGCGCC CCCGTTACAA GCGCACATCG
CATACCGTGA CCGTGGATGT GCCGGAAGAC ATCACGCTCT ACAGCTATCC GGGTGACCTG
ATGCAGGTCG TCACCAACTT CATGACCAAC AGTCTGCTGC ATGGCTTCGA GGATATGGAG
AACGGTCATA TGCGGTTCGT CGCATCCTAC GAGGGCGACA AGGTCGTTCT GGAATACAGC
GACGACGGCA AGGGAATGGA TGCCGACCAT GTGGAGAGGG TCTTCGAACC GTTCTTCACC
ACCAAACGTG GGCATGGTGG CACTGGCCTT GGAATGCATA TCGTCTACAA CATCGTGACC
CAGCGTTTGA AGGGAACCAT CGTGTGCCGC AGTGCACCGG GCGAGGGTGC CGCTTTCAGG
CTGGTGTTCC CGCGTGACGT TCGCAAGGGA GGGGGAAGTG GTGAACGATG A
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| Protein sequence | MLLYFVITFH PAGGRVFLLR VVLFLLIYAS LSGPVLAAGE KRVLVLESGW HDWHWAGEFA
RGVHWVFDAT PGVDVVQNRI DLPHATTPSY EAMLADLLVA RYRDDMPDVV IAGDDRVSKY
LDTYGADIFP HTPKVYCYVL PGGGRVQGVL AGGVVSTPDV AGTLLLMRQM QPRLSHVLVV
NDRSSGTEVI ADEVRRAAAT ALPGVTLAFI DQWTVAELAA RLRSLSPGSA VLFTSLEQDA
VGVRIGSRDL QMLTAVSSVP VYSLWDWHVR LGAVGGVVSD GMGVGGRIAR IAQRWLNGLE
PHLGVESTSI NITLVDALTM ARFGLATGGL PVGASVVNKP PDMREAAPGL FYGGLVVLLV
LSLVVAGLGL NTLQRRKVMR RLSAAESRYR SLFENALEGI FRFSPTQGIL AANPAFASML
GYGGVEGLLA DAGGSMHSLF ESDEEYATLL SRLETDEVLR GVECRLRRRD GTSIVAALSL
RADRGADGDI TLVEGRAVDV TAEKQARADL EVQRERLRLA LDASRDGIWD WDTVNDTVHF
SSRYFTMLGY APDAFANELA VWLDLLHPED RDEAVERARR FVEGVADGDA YETTFRLRAA
DGAYRWVLSR SMAAARDMNR RAIRVVGVHT DVTELREAQE QLASFNRELE ERVKQRTREL
REANQALEFS LDAVRRMQDE LVQSEKMASL GGLVAGVAHE INTPVGIGVT AGSWLAEKTE
ELSRQLAANT MRKSDLERYI ETARESSATI LSNLKRAADL VQSFKQVAVD QTAAEAREFN
LRQFLDEALM SLRPRYKRTS HTVTVDVPED ITLYSYPGDL MQVVTNFMTN SLLHGFEDME
NGHMRFVASY EGDKVVLEYS DDGKGMDADH VERVFEPFFT TKRGHGGTGL GMHIVYNIVT
QRLKGTIVCR SAPGEGAAFR LVFPRDVRKG GGSGER
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